An energetic variational approach to ion channel dynamics

DOI10.1002/MMA.2852MaRDI QIDQ5415919zbMATH OpenOpenAlexFDO

Authors YunKyong Hyon, Bob Eisenberg, Chun Liu

Publication date 19 May 2014

Published in Mathematical Methods in the Applied Sciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1002/mma.2852

zbMATH Keywords

diffusive interface methodenergetic variational approachfinite size effection channelPoisson-Nernst-Planck equationrepulsive potentialvoltage clamp

Mathematics Subject Classification ID

Research exposition (monographs, survey articles) pertaining to partial differential equations (35-02) Variational methods applied to PDEs (35A15) Mixed-type systems of PDEs (35M30) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Cell biology (92C37)

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Cites work

• A diffuse-interface method for simulating two-phase flows of complex fluids
• A mathematical model for the hard sphere repulsion in ionic solutions
• A monotone finite element scheme for convection-diffusion equations
• A phase field model for the mixture of two incompressible fluids and its approximation by a Fourier-spectral method
• DIFFUSE-INTERFACE METHODS IN FLUID MECHANICS
• Energetic variational approach in complex fluids: maximum dissipation principle
• Energy variational approach to study charge inversion (layering) near charged walls
• scientific article; zbMATH DE number 516175 (Why is no real title available?)

Cited in

(16)

• Analysis of fractal ion channel gating kinetics: Kinetic rates, energy levels, and activation energies
• Relative dielectric constants and selectivity ratios in open ionic channels
• Superconvergent gradient recovery for nonlinear Poisson-Nernst-Planck equations with applications to the ion channel problem
• Local averaging type a posteriori error estimates for the nonlinear steady-state Poisson-Nernst-Planck equations
• Quantum dynamics in continuum for proton transport. II: Variational solvent-solute interface
• Modeling and simulation of thermo-fluid-electrochemical ion flow in biological channels
• A new Poisson-Nernst-Planck model with ion-water interactions for charge transport in ion channels
• Transport of charged particles: entropy production and maximum dissipation principle
• An energetic variational approach for ion transport
• Variational multiscale models for charge transport
• Permanent Charge Effects on Ionic Flow: A Numerical Study of Flux Ratios and Their Bifurcation
• Investigating the Selectivity of KcsA Channel by an Image Charge Solvation Method (ICSM) in Molecular Dynamics Simulations
• Linear unconditional energy-stable splitting schemes for a phase-field model for nematic-isotropic flows with anchoring effects
• Interaction of ionic solution with permeable membranes: a variational approach
• Energy variational approach to study charge inversion (layering) near charged walls
• A geometric comparison of single chain multi-state models of ion channel gating

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