An energetic variational approach to ion channel dynamics

DOI10.1002/MMA.2852MaRDI QIDQ5415919zbMATH OpenOpenAlexFDO

Authors YunKyong Hyon, Bob Eisenberg, Chun Liu

Publication date 19 May 2014

Published in Mathematical Methods in the Applied Sciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1002/mma.2852

zbMATH Keywords

ion channelvoltage clampenergetic variational approachPoisson-Nernst-Planck equationrepulsive potentialfinite size effectdiffusive interface method

Mathematics Subject Classification ID

Variational methods applied to PDEs (35A15) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Cell biology (92C37) Research exposition (monographs, survey articles) pertaining to partial differential equations (35-02) Mixed-type systems of PDEs (35M30)

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Cites work

• scientific article; zbMATH DE number 516175 (Why is no real title available?)
• A diffuse-interface method for simulating two-phase flows of complex fluids
• A mathematical model for the hard sphere repulsion in ionic solutions
• A monotone finite element scheme for convection-diffusion equations
• A phase field model for the mixture of two incompressible fluids and its approximation by a Fourier-spectral method
• DIFFUSE-INTERFACE METHODS IN FLUID MECHANICS
• Energetic variational approach in complex fluids: maximum dissipation principle
• Energy variational approach to study charge inversion (layering) near charged walls

Cited in

(16)

• Linear unconditional energy-stable splitting schemes for a phase-field model for nematic-isotropic flows with anchoring effects
• Quantum dynamics in continuum for proton transport. II: Variational solvent-solute interface
• Analysis of fractal ion channel gating kinetics: Kinetic rates, energy levels, and activation energies
• Superconvergent gradient recovery for nonlinear Poisson-Nernst-Planck equations with applications to the ion channel problem
• Modeling and simulation of thermo-fluid-electrochemical ion flow in biological channels
• Investigating the Selectivity of KcsA Channel by an Image Charge Solvation Method (ICSM) in Molecular Dynamics Simulations
• Relative dielectric constants and selectivity ratios in open ionic channels
• Energy variational approach to study charge inversion (layering) near charged walls
• Transport of charged particles: entropy production and maximum dissipation principle
• An energetic variational approach for ion transport
• Permanent Charge Effects on Ionic Flow: A Numerical Study of Flux Ratios and Their Bifurcation
• A new Poisson-Nernst-Planck model with ion-water interactions for charge transport in ion channels
• Local averaging type a posteriori error estimates for the nonlinear steady-state Poisson-Nernst-Planck equations
• Interaction of ionic solution with permeable membranes: a variational approach
• Variational multiscale models for charge transport
• A geometric comparison of single chain multi-state models of ion channel gating

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