Asymptotics for local maximal stack scores with general loop penalty function
From MaRDI portal
Publication:5426469
DOI10.1239/aap/1189518638zbMath1129.60046OpenAlexW2145768888MaRDI QIDQ5426469
Publication date: 12 November 2007
Published in: Advances in Applied Probability (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1239/aap/1189518638
extreme value theoryPoisson approximationRNAreflected random walklocal stackloop penaltymaximal free energy score
Extreme value theory; extremal stochastic processes (60G70) Sums of independent random variables; random walks (60G50) Large deviations (60F10)
Related Items (2)
The maximum of a Lévy process reflected at a general barrier ⋮ A note on first passage probabilities of a L\'evy process reflected at a general barrier
Uses Software
Cites Work
- Unnamed Item
- A phase transition for the minimum free energy of secondary structures of a random RNA
- The Erdős-Rényi law in distribution, for coin tossing and sequence matching
- Sequential analysis. Tests and confidence intervals
- An extreme value theory for sequence matching
- Two moments suffice for Poisson approximations: The Chen-Stein method
- Combinatorics of RNA secondary structures
- Poisson approximation and the Chen-Stein method. With comments and a rejoinder by the authors
- Approximate \(p\)-values for local sequence alignments.
- Critical phenomena for sequence matching with scoring
- Limit distribution of maximal non-aligned two-sequence segmental score
- The maximum of a random walk reflected at a general barrier
- Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes.
- Limit distributions of maximal segmental score among Markov-dependent partial sums
- Rapid and accurate estimates of statistical significance for sequence data base searches.
- Applied Probability and Queues
This page was built for publication: Asymptotics for local maximal stack scores with general loop penalty function