Convergence Analysis of BDDC Preconditioners for Composite DG Discretizations of the Cardiac Cell-By-Cell Model

DOI10.1137/22M1542532MaRDI QIDQ6087750zbMATH OpenFDO

Authors Ngoc Mai Monica Huynh, Fatemeh Chegini, L. F. Pavarino, Martin Weiser, S. Scacchi

Publication date 16 November 2023

Published in SIAM Journal on Scientific Computing (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/2212.12295

zbMATH Keywords

BDDC preconditionerscardiac cell-by-cell modelscomposite discontinuous Galerkin methodsscalable domain decomposition methods

Mathematics Subject Classification ID

Preconditioners for iterative methods (65F08) Iterative numerical methods for linear systems (65F10) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Stability and convergence of numerical methods for initial value and initial-boundary value problems involving PDEs (65M12) Multigrid methods; domain decomposition for initial value and initial-boundary value problems involving PDEs (65M55) Finite element, Rayleigh-Ritz and Galerkin methods for initial value and initial-boundary value problems involving PDEs (65M60) Finite element, Rayleigh-Ritz and Galerkin methods for boundary value problems involving PDEs (65N30) Multigrid methods; domain decomposition for boundary value problems involving PDEs (65N55) Computational methods for problems pertaining to biology (92-08) Physiology (general) (92C30) Cell biology (92C37)

Abstract: A Balancing Domain Decomposition by Constraints (BDDC) preconditioner is constructed and analyzed for the solution of composite Discontinuous Galerkin discretizations of reaction-diffusion systems of ordinary and partial differential equations arising in cardiac cell-by-cell models. Unlike classical Bidomain and Monodomain cardiac models, which rely on homogenized descriptions of cardiac tissue at the macroscopic level, the cell-by-cell models enable the representation of individual cardiac cells, cell aggregates, damaged tissues, and nonuniform distributions of ion channels on the cell membrane. The resulting discrete cell-by-cell models exhibit discontinuous global solutions across the cell boundaries. Therefore, the proposed BDDC preconditioner employs appropriate dual and primal spaces with additional constraints to transfer information between cells (subdomains) without affecting the overall discontinuity of the global solution. A scalable convergence rate bound is proved for the resulting BDDC cell-by-cell preconditioned operator, while numerical tests validate this bound and investigate its dependence on the discretization parameters.

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Cited in

(11)

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