Analysis of autocatalytic networks in biology

DOI10.1016/J.AUTOMATICA.2011.02.040MaRDI QIDQ665134zbMATH OpenOpenAlexFDO

Authors Gentian Buzi, Ufuk Topcu, John C. Doyle

Publication date 5 March 2012

Published in Automatica (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.automatica.2011.02.040

zbMATH Keywords

nonlinear systemscompositional analysisquantitative analysisglycolysisautocatalytic pathways

Mathematics Subject Classification ID

Systems biology, networks (92C42) Large-scale systems (93A15) Canonical structure (93B10)

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Cites work

• scientific article; zbMATH DE number 4017400 (Why is no real title available?)
• scientific article; zbMATH DE number 3702461 (Why is no real title available?)
• A passivity-based stability criterion for a class of biochemical reaction networks
• Diagonal stability of a class of cyclic systems and its connection with the secant criterion
• Dissipative dynamical systems. I: General theory
• Local Stability Analysis for Uncertain Nonlinear Systems
• Local stability analysis using simulations and sum-of-squares programming
• Monotone chemical reaction networks
• Parameter-Dependent Lyapunov Functions for Linear Systems With Constant Uncertainties
• Semidefinite programming relaxations for semialgebraic problems
• The existence and uniqueness of steady states for a class of chemical reaction networks
• The secant condition for instability in biochemical feedback control. I: The role of cooperativity and saturability

Cited in

(7)

• Complexity results for autocatalytic network models
• Analysis of homeostatic mechanisms in biochemical networks
• Collapse of single stable states via a fractal attraction basin: analysis of a representative metabolic network
• Model decomposition and reduction tools for large-scale networks in systems biology
• Stoichiometric analysis of self-maintaining metabolisms
• Using dynamic perturbations to identify fragilities in biochemical networks
• Understanding start-up problems in yeast glycolysis

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