Analysis of autocatalytic networks in biology

DOI10.1016/J.AUTOMATICA.2011.02.040zbMATH Open1235.93020OpenAlexW2158261956MaRDI QIDQ665134FDOQ665134

Authors: Gentian Buzi, Ufuk Topcu, John C. Doyle 

Publication date: 5 March 2012

Published in: Automatica (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.automatica.2011.02.040

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zbMATH Keywords

nonlinear systemscompositional analysisquantitative analysisglycolysisautocatalytic pathways

Mathematics Subject Classification ID

Systems biology, networks (92C42) Large-scale systems (93A15) Canonical structure (93B10)

Cites Work

• Dissipative dynamical systems. I: General theory
• Title not available (Why is that?)
• Semidefinite programming relaxations for semialgebraic problems
• Monotone chemical reaction networks
• Title not available (Why is that?)
• Local Stability Analysis for Uncertain Nonlinear Systems
• The existence and uniqueness of steady states for a class of chemical reaction networks
• The secant condition for instability in biochemical feedback control. I: The role of cooperativity and saturability
• Diagonal stability of a class of cyclic systems and its connection with the secant criterion
• Local stability analysis using simulations and sum-of-squares programming
• A passivity-based stability criterion for a class of biochemical reaction networks
• Parameter-Dependent Lyapunov Functions for Linear Systems With Constant Uncertainties

Cited In (7)

• Complexity results for autocatalytic network models
• Stoichiometric analysis of self-maintaining metabolisms
• Collapse of single stable states via a fractal attraction basin: analysis of a representative metabolic network
• Using dynamic perturbations to identify fragilities in biochemical networks
• Understanding start-up problems in yeast glycolysis
• Analysis of homeostatic mechanisms in biochemical networks
• Model decomposition and reduction tools for large-scale networks in systems biology

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