The existence and uniqueness of steady states for a class of chemical reaction networks
From MaRDI portal
Publication:1912920
DOI10.1007/BF00375614zbMath0853.92024OpenAlexW2023757387WikidataQ56531621 ScholiaQ56531621MaRDI QIDQ1912920
Publication date: 6 January 1997
Published in: Archive for Rational Mechanics and Analysis (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/bf00375614
equivalence relationsequilibriumrankrelational structuresteady statesreaction networksdeficiency-one theoremlinkage classesmass action differential equationsmass reaction systemnon-zero deficiency
Classical flows, reactions, etc. in chemistry (92E20) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)
Related Items
Structure-Preserving Model Reduction of Physical Network Systems ⋮ Independent, Incidence Independent and Weakly Reversible Decompositions of Chemical Reaction Networks ⋮ PLANE LAMINAR FLAMES WITH MULTICOMPONENT TRANSPORT AND COMPLEX CHEMISTRY ⋮ Computational Identification of Irreducible State-Spaces for Stochastic Reaction Networks ⋮ Evolutionary Γ-convergence of gradient systems modeling slow and fast chemical reactions ⋮ Multiscale Simulation of Stochastic Reaction-Diffusion Networks ⋮ Tensor Approximation of Stationary Distributions of Chemical Reaction Networks ⋮ Kac-Rice formulas and the number of solutions of parametrized systems of polynomial equations ⋮ Parameter Region for Multistationarity in \({\boldsymbol{n-}}\)Site Phosphorylation Networks ⋮ Nonlinear algebra and applications ⋮ Combined Newton-gradient method for constrained root-finding in chemical reaction networks ⋮ On balance relations for irreversible chemical reaction networks ⋮ Some minimal bimolecular mass-action systems with limit cycles ⋮ Weakly reversible single linkage class realizations of polynomial dynamical systems: an algorithmic perspective ⋮ Oscillations in planar deficiency-one mass-action systems ⋮ Approximation and inference methods for stochastic biochemical kinetics—a tutorial review ⋮ A compositional framework for reaction networks ⋮ Complex Balancing Reconstructed to the Asymptotic Stability of Mass-Action Chemical Reaction Networks with Conservation Laws ⋮ Weakly Reversible Mass-Action Systems With Infinitely Many Positive Steady States ⋮ Existence of Positive Steady States for Weakly Reversible Mass-Action Systems ⋮ Examples of Computation of Exact Moment Dynamics for Chemical Reaction Networks ⋮ A stratum approach to global stability of complex balanced systems ⋮ The Smallest Multistationary Mass-Preserving Chemical Reaction Network ⋮ Robustness of Stochastic Chemical Reaction Networks to Extrinsic Noise: The Role of Deficiency ⋮ Sign conditions for injectivity of generalized polynomial maps with applications to chemical reaction networks and real algebraic geometry ⋮ Nonnegative Linear Elimination for Chemical Reaction Networks ⋮ An Efficient Characterization of Complex-Balanced, Detailed-Balanced, and Weakly Reversible Systems ⋮ A network dynamics approach to chemical reaction networks ⋮ COMPLEXITY OF BIO-COMPUTATION: SYMBOLIC DYNAMICS IN MEMBRANE SYSTEMS ⋮ A reaction network approach to the convergence to equilibrium of quantum Boltzmann equations for Bose gases ⋮ Systematic Measures of Biological Networks I: Invariant Measures and Entropy ⋮ Nonlinear dynamics of networks: the groupoid formalism ⋮ A Graphic Formulation of Nonisothermal Chemical Reaction Systems and the Analysis of Detailed Balanced Networks ⋮ Systematic Measures of Biological Networks II: Degeneracy, Complexity, and Robustness ⋮ Lyapunov Function Partial Differential Equations for Chemical Reaction Networks: Some Special Cases ⋮ Multistability and sustained oscillations in a model for protein complex formation ⋮ Positive equilibria of Hill-type kinetic systems ⋮ Some consequences of thermodynamic feasibility for chemical reaction networks. Considering thermodynamic feasibility in current CRN research ⋮ Computing the structural influence matrix for biological systems ⋮ The kinetic space of multistationarity in dual phosphorylation ⋮ Weakly reversible CF-decompositions of chemical kinetic systems ⋮ A coordinate-independent version of Hoppensteadt's convergence theorem ⋮ Node balanced steady states: unifying and generalizing complex and detailed balanced steady states ⋮ Stability analysis of the Michaelis-Menten approximation of a mixed mechanism of a phosphorylation system ⋮ Port-Hamiltonian modeling of non-isothermal chemical reaction networks ⋮ Necessary and sufficient conditions for protocell growth ⋮ A linear programming approach to dynamical equivalence, linear conjugacy, and the deficiency one theorem ⋮ Multiple steady states for chemical reaction networks of deficiency one ⋮ Realizations of quasi-polynomial systems and application for stability analysis ⋮ Structural analysis in biology: a control-theoretic approach ⋮ Quasi-steady state reduction for compartmental systems ⋮ Polyhedral Lyapunov functions structurally ensure global asymptotic stability of dynamical networks iff the Jacobian is non-singular ⋮ Concordant chemical reaction networks ⋮ A reaction network approach to the theory of acoustic wave turbulence ⋮ Product-form stationary distributions for deficiency zero chemical reaction networks ⋮ Sensitivity of chemical reaction networks: a structural approach. 1. Examples and the carbon metabolic network ⋮ A deficiency-based approach to parametrizing positive equilibria of biochemical reaction systems ⋮ Computing weakly reversible deficiency zero network translations using elementary flux modes ⋮ New criteria for the existence of a positive equilibrium in reaction networks ⋮ Steady-states of receptor-ligand dynamics: a theoretical framework ⋮ A computational approach to steady state correspondence of regular and generalized mass action systems ⋮ Tikhonov-Fenichel reduction for parameterized critical manifolds with applications to chemical reaction networks ⋮ Catalysis in reaction networks ⋮ Chemical reaction systems with toric steady states ⋮ Chemical reaction network approaches to biochemical systems theory ⋮ Instantaneous limits of reversible chemical reactions in presence of macroscopic convection. ⋮ Lyapunov functions, stationary distributions, and non-equilibrium potential for reaction networks ⋮ On classes of reaction networks and their associated polynomial dynamical systems ⋮ A computational approach to persistence, permanence, and endotacticity of biochemical reaction systems ⋮ Modular dynamical systems on networks ⋮ Notes on the deficiency-one theorem: multiple linkage classes ⋮ Robustness in power-law kinetic systems with reactant-determined interactions ⋮ Positive equilibria of power law kinetics on networks with independent linkage classes ⋮ Qualitative analysis of an ODE model of a class of enzymatic reactions. Some results on global stability of messenger RNA-microRNA interaction ⋮ On the existence of the positive steady states of weakly reversible deficiency-one mass action systems ⋮ Positive equilibria of a class of power-law kinetics ⋮ Monotonicity of interleukin-1 receptor-ligand binding with respect to antagonist in the presence of decoy receptor ⋮ Multistationarity in sequential distributed multisite phosphorylation networks ⋮ Linear conjugacy of chemical reaction networks ⋮ Equilibria and stability of a class of positive feedback loops. Mathematical analysis and its application to caspase-dependent apoptosis ⋮ A deficiency-one algorithm for power-law kinetic systems with reactant-determined interactions ⋮ On the dependence of the existence of the positive steady states on the rate coefficients for deficiency-one mass action systems: single linkage class ⋮ A graph-theoretical approach for the analysis and model reduction of complex-balanced chemical reaction networks ⋮ Multistationarity in mass action networks with applications to ERK activation ⋮ Translated chemical reaction networks ⋮ Hamiltonian perspective on compartmental reaction-diffusion networks ⋮ Routes to multiple equilibria for mass-action kinetic systems ⋮ An observer for mass-action chemical reaction networks ⋮ A feedback control perspective on models of apoptosis signal transduction ⋮ Trend to equilibrium of renormalized solutions to reaction-cross-diffusion systems ⋮ Piecewise-linear Lyapunov functions for structural stability of biochemical networks ⋮ On system state equipartitioning and semistability in network dynamical systems with arbitrary time-delays ⋮ Arc-length-based Lyapunov tests for convergence and stability with applications to systems having a continuum of equilibria ⋮ Toric ideals and graph theory to analyze Hopf bifurcations in mass action systems ⋮ A unified view on bipartite species-reaction graphs and their relation to interaction graphs and qualitative dynamics of chemical reaction networks ⋮ Traveling composition waves on isothermal catalyst surfaces ⋮ Analysis of autocatalytic networks in biology ⋮ Positive equilibria of weakly reversible power law kinetic systems with linear independent interactions ⋮ Identifiability of chemical reaction networks ⋮ Graph-theoretic methods for the analysis of chemical and biochemical networks. I. Multistability and oscillations in ordinary differential equation models ⋮ Good and bad children in metabolic networks ⋮ Long-term behaviours of autocatalytic sets ⋮ Complex and detailed balancing of chemical reaction networks revisited ⋮ A constructive approach to quasi-steady state reductions ⋮ Global stability of a class of futile cycles ⋮ Network translation and steady-state properties of chemical reaction systems ⋮ Intermediates, catalysts, persistence, and boundary steady states ⋮ Preclusion of switch behavior in networks with mass-action kinetics ⋮ A symbolic computation approach to a problem involving multivariate Poisson distributions ⋮ A Petri net approach to the study of persistence in chemical reaction networks ⋮ The multistationarity structure of networks with intermediates and a binomial core network ⋮ Methods for and results from the study of design principles in molecular systems ⋮ Design principles for robust biochemical reaction networks: what works, what cannot work, and what might almost work ⋮ How far is complex balancing from detailed balancing? ⋮ Multistationarity in the space of total concentrations for systems that admit a monomial parametrization ⋮ Boundedness analysis for open chemical reaction networks with mass-action kinetics ⋮ On the relation between reactions and complexes of (bio)chemical reaction networks ⋮ Insufficiency of chemical network model integration using a high-order Taylor series method ⋮ Bernstein's second theorem and Viro's method for sparse polynomial systems in chemistry ⋮ Sensitivity of chemical reaction networks: a structural approach. 2. Regular monomolecular systems ⋮ Gain and loss of function mutations in biological chemical reaction networks: a mathematical model with application to colorectal cancer cells ⋮ Independent decompositions of chemical reaction networks ⋮ State-estimators for chemical reaction networks of Feinberg-Horn-Jackson zero deficiency type ⋮ Homotopy methods for counting reaction network equilibria ⋮ Toric dynamical systems ⋮ Univalent positive polynomial maps and the equilibrium state of chemical networks of reversible binding reactions ⋮ Exponential time decay of solutions to reaction-cross-diffusion systems of Maxwell-Stefan type ⋮ A computational approach to multistationarity of power-law kinetic systems ⋮ The deficiency zero theorem and global asymptotic stability for a class of chemical reaction networks with arbitrary time delays ⋮ Analysis of mass-action systems by split network translation ⋮ Stability and dissipativity theory for nonnegative dynamical systems: a unified analysis framework for biological and physiological systems ⋮ Chemical reaction network decomposition technique for stability analysis ⋮ Sharper graph-theoretical conditions for the stabilization of complex reaction networks ⋮ A family of sparse polynomial systems arising in chemical reaction systems ⋮ On non-ideal chemical-reaction networks and phase separation
Cites Work
