The multistationarity structure of networks with intermediates and a binomial core network
From MaRDI portal
Publication:2002118
Abstract: This work addresses whether a reaction network, taken with mass-action kinetics, is multistationary, that is, admits more than one positive steady state in some stoichiometric compatibility class. We build on previous work on the effect that removing or adding intermediates has on multistationarity, and also on methods to detect multistationarity for networks with a binomial steady state ideal. In particular, we provide a new determinant criterion to decide whether a network is multistationary, which applies when the network obtained by removing intermediates has a binomial steady state ideal. We apply this method to easily characterize which subsets of complexes are responsible for multistationarity; this is what we call the emph{multistationarity structure} of the network. We use our approach to compute the multistationarity structure of the -site sequential distributive phosphorylation cycle for arbitrary n.
Recommendations
- scientific article; zbMATH DE number 6379360
- Properties of the network model with different types of nodes in the stationary regime
- Stochastic networks with multiple stable points
- scientific article; zbMATH DE number 5521034
- A stochastic model for multi-hierarchical networks
- A characterization of stochastically stable networks
- scientific article; zbMATH DE number 4139561
- Structure properties of a doubly-stochastic process on a network
- scientific article; zbMATH DE number 1961291
Cites work
- A case study on the parametric occurrence of multiple steady states
- A package for solving parametric polynomial systems
- Algorithms in real algebraic geometry
- Binomial ideals
- Chemical reaction systems with toric steady states
- Graphical reduction of reaction networks by linear elimination of species
- Gröbner bases of reaction networks with intermediate species
- Improving the use of equational constraints in cylindrical algebraic decomposition
- Multistationarity in structured reaction networks
- On the number of steady states in a multiple futile cycle
- Regions of multistationarity in cascades of Goldbeter-Koshland loops
- Sign conditions for injectivity of generalized polynomial maps with applications to chemical reaction networks and real algebraic geometry
- Solving parametric polynomial systems
- The existence and uniqueness of steady states for a class of chemical reaction networks
- The structure of MESSI biological systems
Cited in
(19)- Oscillations and bistability in a model of ERK regulation
- Testing binomiality of chemical reaction networks using comprehensive Gröbner systems
- Analyzing multistationarity in chemical reaction networks using the determinant optimization method
- On the existence of Hopf bifurcations in the sequential and distributive double phosphorylation cycle
- Multistationarity in the space of total concentrations for systems that admit a monomial parametrization
- Families of polynomials in the study of biochemical reaction networks
- Multiperiod medians on networks
- Symbolic Proof of Bistability in Reaction Networks
- Bistability of sequestration networks
- Multistationarity questions in reduced versus extended biochemical networks
- Algebra and geometry in the study of enzymatic cascades
- Multistationarity in cyclic sequestration-transmutation networks
- Kac-Rice formulas and the number of solutions of parametrized systems of polynomial equations
- Parameter regions that give rise to \(2\lfloor \frac{n}{2} \rfloor +1\) positive steady states in the \(n\)-site phosphorylation system
- Dynamics of ERK regulation in the processive limit
- Families of toric chemical reaction networks
- Power-law kinetics and determinant criteria for the preclusion of multistationarity in networks of interacting species
- Multistationarity in structured reaction networks
- scientific article; zbMATH DE number 4139561 (Why is no real title available?)
This page was built for publication: The multistationarity structure of networks with intermediates and a binomial core network
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2002118)