Algebra and geometry in the study of enzymatic cascades
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Publication:3296189
Biochemistry, molecular biology (92C40) Applications of commutative algebra (e.g., to statistics, control theory, optimization, etc.) (13P25) Computational methods for problems pertaining to biology (92-08) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)
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Cites work
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- scientific article; zbMATH DE number 575960 (Why is no real title available?)
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- Descartes' rule of signs for polynomial systems supported on circuits
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- Reachability, persistence, and constructive chemical reaction networks. II: A formalism for species composition in chemical reaction network theory and application to persistence
- Reachability, persistence, and constructive chemical reaction networks. III: A mathematical formalism for binary enzymatic networks and application to persistence
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- Sustained oscillations in the MAP kinase cascade
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- The multistationarity structure of networks with intermediates and a binomial core network
- The rational parameterisation theorem for multisite post-translational modification systems
- The structure of MESSI biological systems
- Toric ideals and graph theory to analyze Hopf bifurcations in mass action systems
- Which small reaction networks are multistationary?
Cited in
(7)- Families of polynomials in the study of biochemical reaction networks
- Biochemical reaction networks: An invitation for algebraic geometers
- The rational parameterisation theorem for multisite post-translational modification systems
- The structure of MESSI biological systems
- Stieltjes integration and differential geometry: A model for enzyme recognition, discrimination, and catalysis
- An algebraic approach to signaling cascades with \(n\) layers
- A stochastic analysis of particle systems with pairing
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