Multistationarity in the space of total concentrations for systems that admit a monomial parametrization
From MaRDI portal
Publication:2008268
DOI10.1007/s11538-019-00639-4zbMath1427.92039arXiv1810.08152OpenAlexW3106420751WikidataQ92096330 ScholiaQ92096330MaRDI QIDQ2008268
Thomas Kahle, Carsten Conradi, Alexandru Iosif
Publication date: 22 November 2019
Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1810.08152
Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Systems biology, networks (92C42) Solving polynomial systems; resultants (13P15)
Related Items (8)
The steady-state degree and mixed volume of a chemical reaction network ⋮ Kac-Rice formulas and the number of solutions of parametrized systems of polynomial equations ⋮ Parameter Region for Multistationarity in \({\boldsymbol{n-}}\)Site Phosphorylation Networks ⋮ Families of toric chemical reaction networks ⋮ Algebra and Geometry in the Study of Enzymatic Cascades ⋮ Efficiently and effectively recognizing toricity of steady state varieties ⋮ Parameter regions that give rise to \(2\lfloor \frac{n}{2} \rfloor +1\) positive steady states in the \(n\)-site phosphorylation system ⋮ Oscillations and bistability in a model of ERK regulation
Uses Software
Cites Work
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Algebraic systems biology: a case study for the Wnt pathway
- Chemical reaction systems with toric steady states
- Multistationarity in mass action networks with applications to ERK activation
- Decompositions of commutative monoid congruences and binomial ideals.
- \(n\)-site phosphorylation systems with \(2n-1\) steady states
- Siphons in chemical reaction networks
- Toric dynamical systems
- Graph-theoretic criteria for injectivity and unique equilibria in general chemical reaction systems
- On the number of steady states in a multiple futile cycle
- Graphs of transportation polytopes
- Computation of real radicals of polynomial ideals. II
- Algebraic methods for inferring biochemical networks: a maximum likelihood approach
- The existence and uniqueness of steady states for a class of chemical reaction networks
- Multiple steady states for chemical reaction networks of deficiency one
- Binomial ideals
- Concordant chemical reaction networks
- Concordant chemical reaction networks and the species-reaction graph
- The multistationarity structure of networks with intermediates and a binomial core network
- Preclusion of switch behavior in networks with mass-action kinetics
- Lower bounds for positive roots and regions of multistationarity in chemical reaction networks
- Graph-theoretic approaches to injectivity and multiple equilibria in systems of interacting elements
- Multistationarity in structured reaction networks
- Gröbner bases of reaction networks with intermediate species
- Multistationarity in sequential distributed multisite phosphorylation networks
- Solving parametric polynomial systems
- Multistationarity in the activation of a MAPK: parametrizing the relevant region in parameter space
- Power-Law Kinetics and Determinant Criteria for the Preclusion of Multistationarity in Networks of Interacting Species
- Black-box/white-box simplification and applications to quantifier elimination
- The Structure of MESSI Biological Systems
- Biochemical reaction networks: An invitation for algebraic geometers
- Multistationarity in Biochemical Networks: Results, Analysis, and Examples
- QEPCAD B
- A Case Study on the Parametric Occurrence of Multiple Steady States
- Convex Analysis
- Sign conditions for injectivity of generalized polynomial maps with applications to chemical reaction networks and real algebraic geometry
This page was built for publication: Multistationarity in the space of total concentrations for systems that admit a monomial parametrization
