Translated chemical reaction networks
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Publication:458720
DOI10.1007/s11538-014-9947-5zbMath1297.92096arXiv1305.5845WikidataQ51103659 ScholiaQ51103659MaRDI QIDQ458720
Publication date: 8 October 2014
Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1305.5845
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Cites Work
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Chemical reaction systems with toric steady states
- Multistationarity in mass action networks with applications to ERK activation
- How far is complex balancing from detailed balancing?
- Smallest chemical reaction system with Hopf bifurcation
- Toric dynamical systems
- On the number of steady states in a multiple futile cycle
- Mathematical analysis of the smallest chemical reaction system with Hopf bifurcation
- A family of sparse polynomial systems arising in chemical reaction systems
- Bernstein's second theorem and Viro's method for sparse polynomial systems in chemistry
- The existence and uniqueness of steady states for a class of chemical reaction networks
- Multiple steady states for chemical reaction networks of deficiency one
- Concordant chemical reaction networks
- Multistationarity in sequential distributed multisite phosphorylation networks
- Translation-invariant monotone systems, and a global convergence result for enzymatic futile cycles
- Multistationarity in the activation of a MAPK: parametrizing the relevant region in parameter space
- A Petri net approach to the study of persistence in chemical reaction networks
- Generalized Mass Action Systems: Complex Balancing Equilibria and Sign Vectors of the Stoichiometric and Kinetic-Order Subspaces
- Multiple Equilibria in Complex Chemical Reaction Networks: I. The Injectivity Property
- Multiple Equilibria in Complex Chemical Reaction Networks: II. The Species-Reaction Graph
- Sign conditions for injectivity of generalized polynomial maps with applications to chemical reaction networks and real algebraic geometry