Linear conjugacy of chemical reaction networks

DOI10.1007/s10910-011-9817-4zbMath1303.92153arXiv1101.1663MaRDI QIDQ645135

David Siegel, Matthew D. Johnston

Publication date: 8 November 2011

Published in: Journal of Mathematical Chemistry (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1101.1663

zbMATH Keywords

persistence; chemical kinetics; stability theory; dynamical equivalence; complex balancing

Mathematics Subject Classification ID

92E20: Classical flows, reactions, etc. in chemistry

34A34: Nonlinear ordinary differential equations and systems

34C60: Qualitative investigation and simulation of ordinary differential equation models

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Cites Work

• Unnamed Item
• Unnamed Item
• Toric dynamical systems
• Comment on ``Identifiability of chemical reaction networks by G. Craciun and C. Pantea
• Computing sparse and dense realizations of reaction kinetic systems
• Identifiability of chemical reaction networks
• The existence and uniqueness of steady states for a class of chemical reaction networks
• A Petri net approach to the study of persistence in chemical reaction networks
• The Dynamics of Weakly Reversible Population Processes near Facets
• Global Asymptotic Stability for a Class of Nonlinear Chemical Equations
• Structure and stability of certain chemical networks and applications to the kinetic proofreading model of T-cell receptor signal transduction
• Multiple Equilibria in Complex Chemical Reaction Networks: I. The Injectivity Property
• Multiple Equilibria in Complex Chemical Reaction Networks: II. The Species-Reaction Graph
• Algebraic Statistics for Computational Biology
• Global stability of complex balanced mechanisms