Fast computation of minimal elementary decompositions of metabolic flux vectors

DOI10.1016/J.AUTOMATICA.2011.01.011MaRDI QIDQ665165zbMATH OpenOpenAlexFDO

Authors Francisca Zamorano, Alain Vande Wouwer, Georges Bastin, Raphaël M. Jungers, Vincent D. Blondel

Publication date 5 March 2012

Published in Automatica (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.automatica.2011.01.011

zbMATH Keywords

modeling and identificationelementary flux modesanimal cellsmetabolic engineering

Mathematics Subject Classification ID

Systems biology, networks (92C42)

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Cites work

• scientific article; zbMATH DE number 2107836 (Why is no real title available?)
• Fast computation of minimal elementary decompositions of metabolic flux vectors
• Geometric algorithms and combinatorial optimization
• Sparse nonnegative solution of underdetermined linear equations by linear programming

Cited in

(6)

• Invariant manifold methods for metabolic model reduction
• Robustness analysis of elementary flux modes generated by column generation
• Fast computation of minimal elementary decompositions of metabolic flux vectors
• Finding MEMo: minimum sets of elementary flux modes
• On the geometry of elementary flux modes
• On dynamically generating relevant elementary flux modes in a metabolic network using optimization

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