Tracking rapid intracellular movements: a Bayesian random set approach
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Publication:746682
DOI10.1214/15-AOAS819zbMATH Open1454.62363arXiv1509.04841OpenAlexW1856550905MaRDI QIDQ746682FDOQ746682
Authors: Vasileios Maroulas, Andreas Nebenführ 
Publication date: 28 October 2015
Published in: The Annals of Applied Statistics (Search for Journal in Brave)
Abstract: We focus on the biological problem of tracking organelles as they move through cells. In the past, most intracellular movements were recorded manually, however, the results are too incomplete to capture the full complexity of organelle motions. An automated tracking algorithm promises to provide a complete analysis of noisy microscopy data. In this paper, we adopt statistical techniques from a Bayesian random set point of view. Instead of considering each individual organelle, we examine a random set whose members are the organelle states and we establish a Bayesian filtering algorithm involving such set states. The propagated multi-object densities are approximated using a Gaussian mixture scheme. Our algorithm is applied to synthetic and experimental data.
Full work available at URL: https://arxiv.org/abs/1509.04841
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cardinalized probability hypothesis densityfinite set statisticsGaussian mixture implementationmonitoring intracellular movementsmulti-object Bayesian filteringrandom finite set theory
Cites Work
- Monte Carlo strategies in scientific computing.
- Sequential Monte Carlo Methods in Practice
- Title not available (Why is that?)
- A new metric between distributions of point processes
- A Consistent Metric for Performance Evaluation of Multi-Object Filters
- Sequential Monte Carlo Methods for Dynamic Systems
- An introduction to the theory of point processes
- Following a moving target -- Monte Carlo inference for dynamic Bayesian models
- Statistical multisource-multitarget information fusion.
- Mathematics of data fusion
- Particle filtering with path sampling and an application to a bimodal ocean current model
- Improved particle filters for multi-target tracking
- Title not available (Why is that?)
- Analytic Implementations of the Cardinalized Probability Hypothesis Density Filter
- Title not available (Why is that?)
- A mixture model for quantum dot images of kinesin motor assays
- Likelihood inference for particle location in fluorescence microscopy
Cited In (18)
- Micro-object motion tracking based on the probability hypothesis density particle tracker
- A Hybrid Approach to the 3D High Precision Position Measurement and Particle Tracking in Human Cell Nuclei
- A Bayesian Topological Framework for the Identification and Reconstruction of Subcellular Motion
- Lévy backward SDE filter for jump diffusion processes and its applications in material sciences
- Adaptive meshfree backward SDE filter
- Identifying directional persistence in intracellular particle motion using hidden Markov models
- Probabilistic reconstruction of truncated particle trajectories on a closed surface
- Rejoinder
- Improved distributed particle filters for tracking in a wireless sensor network
- Large deviations for the optimal filter of nonlinear dynamical systems driven by Lévy noise
- Signal classification with a point process distance on the space of persistence diagrams
- Probabilistic tracking and behavior identification of fluorescent particles
- Three-dimensional tracking of GLUT4 vesicles in TIRF microscopy
- Convergence rates for residual branching particle filters
- Consistency and asymptotics of a Poisson intensity least-squares estimator for partially observed jump-diffusion processes
- Tracking multiple moving objects in images using Markov chain Monte Carlo
- A Bayesian framework for persistent homology
- Bayesian topological learning for classifying the structure of biological networks
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