A simple method for computing exact probabilities of mutation numbers

DOI10.1016/J.TPB.2003.12.001zbMATH Open1109.92033OpenAlexW1969884397WikidataQ51636894 ScholiaQ51636894MaRDI QIDQ851379FDOQ851379

Authors: Marcy K. Uyenoyama, Naoki Takebayashi 

Publication date: 20 November 2006

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2003.12.001

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zbMATH Keywords

Maximum likelihoodMigrationRecombination\(S\)-locusPopulation structureSegregating sitesSelf-incompatibility

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Markov processes (60J99)

Cites Work

• Title not available (Why is that?)
• Title not available (Why is that?)
• On the number of segregating sites in genetical models without recombination
• The coalescent and genealogical process in geographically structured population
• Simulating probability distributions in the coalescent
• Line-of-descent and genealogical processes, and their applications in population genetics models
• Statistical properties of segregating sites
• Segregating sites in Wright's island model
• A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism.
• A perturbation method for the structured coalescent with strong migration
• The use of sample genealogies for studying a selectively neutral m-loci model with recombination
• The two-locus ancestral graph in a subdivided population: convergence as the number of demes grows in the island model
• The structured coalescent process with weak migration
• Genealogy-dependent variation in viability among self-incompatibility genotypes
• The ancestral graph and gene genealogy under frequency-dependent selection

Cited In (3)

• The expected number of alleles in a gene conversion model with mutation
• Probability that a sequence is lost without trace under the neutral Wright-Fisher model with recombination
• Genealogical histories in structured populations

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