SDPBS web server for calculation of electrostatics of ionic solvated biomolecules
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Cites work
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- A Poisson-Boltzmann equation test model for protein in spherical solute region and its applications
- A fast solver for a nonlocal dielectric continuum model
- A new analysis of electrostatic free energy minimization and Poisson-Boltzmann equation for protein in ionic solvent
- A new finite element and finite difference hybrid method for computing electrostatics of ionic solvated biomolecule
- A new linear Poisson-Boltzmann equation and finite element solver by solution decomposition approach
- A new minimization protocol for solving nonlinear Poisson-Boltzmann mortar finite element equation
- A nonlinear elasticity model of macromolecular conformational change induced by electrostatic forces
- A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules
- Accurate evaluation of electrostatics for macromolecules in solution
- Adaptive finite element modeling techniques for the Poisson-Boltzmann equation
- An effective minimization protocol for solving a size-modified Poisson-Boltzmann equation for biomolecule in ionic solvent
- Automated solution of differential equations by the finite element method. The FEniCS book
- DelPhi web server: A comprehensive online suite for electrostatic calculations of biological macromolecules and their complexes
- Efficient Algorithms for a Nonlocal Dielectric Model for Protein in Ionic Solvent
- Efficient and qualified mesh generation for Gaussian molecular surface using adaptive partition and piecewise polynomial approximation
- New solution decomposition and minimization schemes for Poisson-Boltzmann equation in calculation of biomolecular electrostatics
- The Finite Element Approximation of the Nonlinear Poisson–Boltzmann Equation
- ``New-version-fast-multipole-method accelerated electrostatic calculations in biomolecular sys\-tems
Cited in
(8)- A flux-jump preserved gradient recovery technique for accurately predicting the electrostatic field of an immersed biomolecule
- A Domain Decomposition Method for the Poisson--Boltzmann Solvation Models
- SDPBS
- DelPhi web server: A comprehensive online suite for electrostatic calculations of biological macromolecules and their complexes
- A nonlocal modified Poisson-Boltzmann equation and finite element solver for computing electrostatics of biomolecules
- A hybrid solver of size modified Poisson-Boltzmann equation by domain decomposition, finite element, and finite difference
- On developing stable finite element methods for pseudo-time simulation of biomolecular electrostatics
- Poisson-Boltzmann model for protein-surface electrostatic interactions and grid-convergence study using the \textsc{PyGBe} code
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