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swMATH8915MaRDI QIDQ20911FDOQ20911

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Cited In (28)

• Global and local sequence alignment with a bounded number of gaps
• Algorithmic Framework for Approximate Matching Under Bounded Edits with Applications to Sequence Analysis
• Extending alignments with \(k\)-mismatches and \(\ell\)-gaps
• Multi-pattern matching with bidirectional indexes
• Efficient construction of a complete index for pan-genomics read alignment
• Computing the multi-string BWT and LCP array in external memory
• An algorithm for mapping short reads to a dynamically changing genomic sequence
• Approximate all-pairs suffix/prefix overlaps
• CUSHAW Suite: Parallel and Efficient Algorithms for NGS Read Alignment
• Title not available (Why is that?)
• Data mining techniques for the life sciences
• Statistical genomics. Methods and protocols
• Comparative Assessment of Alignment Algorithms for NGS Data: Features, Considerations, Implementations, and Future
• A randomized numerical aligner (rNA)
• Title not available (Why is that?)
• Indeterminate string factorizations and degenerate text transformations
• Comparing DNA Sequence Collections by Direct Comparison of Compressed Text Indexes
• Textual data compression in computational biology: algorithmic techniques
• An overview of multiple sequence alignments and cloud computing in bioinformatics
• Title not available (Why is that?)
• Designing Efficient Spaced Seeds for SOLiD Read Mapping
• Bioinformatics. Volume I. Data, sequence analysis, and evolution
• A survey of string orderings and their application to the Burrows-Wheeler transform
• Quantifying alternative splicing from paired-end RNA-sequencing data
• Fixed block compression boosting in FM-indexes: theory and practice
• On the string matching with \(k\) mismatches
• BM-map: Bayesian mapping of multireads for next-generation sequencing data
• DRESS: dimensionality reduction for efficient sequence search

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