Chimera

swMATH10908MaRDI QIDQ22860FDOQ22860

Author name not available (Why is that?)

Official website: http://www.cgl.ucsf.edu/chimera/

Cited In (38)

• Manifold learning with arbitrary norms
• GANM: A protein-ligand docking approach based on genetic algorithm and normal modes
• Nonuniform Fourier transforms for rigid-body and multidimensional rotational correlations
• Molecular dynamics study on the ligand recognition by tandem SH3 domains of p47phox, regulating NADPH oxidase activity
• Implication of crystal water molecules in inhibitor binding at ALR2 active site
• Revealing - 1 programmed ribosomal frameshifting mechanisms by single-molecule techniques and computational methods
• An overset grid method for integration of fully 3D fluid dynamics and geophysics fluid dynamics models to simulate multiphysics coastal ocean flows
• In silico analyses of a new group of fungal and plant RecQ4-homologous proteins
• Topological methods in data analysis and visualization IV. Theory, algorithms, and applications. Selected papers based on the presentations at the TopoInVis workshop, Annweiler, Germany, 2015
• Computational and visualization techniques for structural bioinformatics using Chimera
• Efficient use of semidefinite programming for selection of rotamers in protein conformations
• EMan
• MEGA
• SYBYL
• ESyPred3D
• Analysis of the interaction of the Eg5 Loop5 with the nucleotide site
• HYCOM
• RELION
• SPARX
• PROMOTIF
• Visualizing the dual space of biological molecules
• Visualization in Medicine and Life Sciences II. Progress and New Challenges. Selected papers based on the presentations at the second international workshop, VMLS, Bremerhaven, Germany, June 22--24, 2009
• An adaptive discretization of incompressible flow using a multitude of moving Cartesian grids
• Genuinely multi-dimensional explicit and implicit generalized Shapiro filters for weather forecasting, computational fluid dynamics and aeroacoustics
• Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes
• A common lines approach for \textit{ab initio} modeling of cyclically symmetric molecules
• Using computational approaches to study dengue virus capsid assembly
• Efficient software for programmable visual analysis using Morse-Smale complexes
• Viral capsid nanoindentation simulations using octree-type data structures
• A grid-based genetic algorithm combined with an adaptive simulated annealing for protein structure prediction
• Constraint programming in structural bioinformatics
• Enzymatic reaction sites on a plane formed with four exon-junctions
• Exploration of synthetic multifunctional amides as new therapeutic agents for Alzheimer's disease through enzyme inhibition, chemoinformatic properties, molecular docking and dynamic simulation insights
• Immunoinformatics and molecular docking studies reveal potential epitope-based peptide vaccine against DENV-NS3 protein
• Iterative hybrid regularization for extremely noisy full models in single particle analysis
• Computation of real-valued basis functions which transform as irreducible representations of the polyhedral groups
• Correlation between sequence, structure and function for trisporoid processing proteins in the model zygomycete \textit{Mucor mucedo}
• \textit{In silico} analysis of \textit{plasmodium falciparum} CDPK5 protein through molecular modeling, docking and dynamics

This page was built for software: Chimera