Supervised Adversarial Alignment of Single-Cell RNA-seq Data

DOI10.1007/978-3-030-45257-5_5MaRDI QIDQ5041799zbMATH OpenOpenAlexFDO

Authors Songwei Ge, Haohan Wang, Eric P. Xing, Ziv Bar-Joseph, Amir Hossein Alavi

Publication date 14 October 2022

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-030-45257-5_5

zbMATH Keywords

batch effect removaldata integrationdimensionality reductiondomain adversarial trainingsingle-cell RNA-seq

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

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Cites work

• Domain-adversarial training of neural networks

Cited in

(4)

• Adapted single-cell consensus clustering (adaSC3)
• Benchmarking penalized regression methods in machine learning for single cell RNA sequencing data
• Disentangled representations of cellular identity
• Stratified test alleviates batch effects in single-cell data

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