TreeSolve: rapid error-correction of microbial gene trees

DOI10.1007/978-3-030-42266-0_10MaRDI QIDQ5041141zbMATH OpenOpenAlexWikidataFDO

Authors Misagh Kordi, Mukul S. Bansal

Publication date 13 October 2022

Published in Algorithms for Computational Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-030-42266-0_10

zbMATH Keywords

gene tree reconstructionhorizontal gene transfermicrobial evolutionphylogenetics

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Problems related to evolution (92D15) Time-scale analysis and singular perturbations in control/observation systems (93C70)

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Cited in

(4)

• On partial gene transfer and its impact on gene tree reconstruction
• QT-GILD: Quartet based gene tree imputation using deep learning improves phylogenomic analyses despite missing data
• TRACTION: fast non-parametric improvement of estimated gene trees
• Gene Tree Correction by Leaf Removal and Modification: Tractability and Approximability

Describes a project that uses

Uses Software

• TERA

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