Using pseudo-amino acid composition and support vector machine to predict protein structural class

From MaRDI portal
Revision as of 02:37, 2 February 2024 by Import240129110113 (talk | contribs) (Created automatically from import240129110113)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Publication:2202397


DOI10.1016/j.jtbi.2006.06.025zbMath1447.92300WikidataQ34557096 ScholiaQ34557096MaRDI QIDQ2202397

Pei-Xiang Cai, Xiao-Yong Zou, Chao Chen, Jin-Yuan Mo, Yuan-Xin Tian

Publication date: 18 September 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2006.06.025


92D20: Protein sequences, DNA sequences

92-08: Computational methods for problems pertaining to biology


Related Items

Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition, Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation, Some remarks on protein attribute prediction and pseudo amino acid composition, Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC, Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition, A study of entropy/clarity of genetic sequences using metric spaces and fuzzy sets, Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern, The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition, Predicting protein structural class based on multi-features fusion, Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image, Novel scales based on hydrophobicity indices for secondary protein structure, Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes, \(\gamma\)-Turn types prediction in proteins using the support vector machines, Novel 3D bio-macromolecular bilinear descriptors for protein science: predicting protein structural classes, Improving the prediction accuracy of protein structural class: approached with alternating word frequency and normalized Lempel-Ziv complexity, A protein structural classes prediction method based on PSI-BLAST profile, Using protein granularity to extract the protein sequence features


Uses Software


Cites Work