Quantitative immunology for physicists

DOI10.1016/j.physrep.2020.01.001zbMath1436.92005arXiv1907.03891OpenAlexW3102088880MaRDI QIDQ2306203

Grégoire Altan-Bonnet, Thierry Mora, Aleksandra M. Walczak

Publication date: 20 March 2020

Published in: Physics Reports (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1907.03891

zbMATH Keywords

geneticsecological modelscell communicationadaptive immune systemligand-receptor interactionpathogen population dynamics

Mathematics Subject Classification ID

Population dynamics (general) (92D25) Biochemistry, molecular biology (92C40) Physiology (general) (92C30) Ecology (92D40) Cell biology (92C37) Genetics and epigenetics (92D10) Research exposition (monographs, survey articles) pertaining to biology (92-02)

Related Items (3)

Extreme value statistics of positive recurrent centrally biased random walks ⋮ Tregs self-organize into a computing ecosystem and implement a sophisticated optimization algorithm for mediating immune response ⋮ Modeling the development of cellular exhaustion and tumor-immune stalemate

Uses Software

• RAxML
• shazam
• pRESTO
• SoDA2
• OLGA
• repgenHMM
• DeepTCR
• Ace
• Change-O
• Alakazam

Cites Work

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• How many TCR clonotypes does a body maintain?
• The value of information for populations in varying environments
• Quantifying T lymphocyte turnover
• Dynamics of one-pass germinal center models: implications for affinity maturation
• Stochastic effects and bistability in T cell receptor signaling
• Combining cytokine signalling with T-bet and GATA-3 regulation in Th1 and Th2 differentiation: a model for cellular decision-making
• Survival analysis of DNA mutation motifs with penalized proportional hazards
• Cluster Analysis
• Estimating the Number of Species in a Stochastic Abundance Model
• ON A CLASS OF SKEW DISTRIBUTION FUNCTIONS
• Evolution of molecular phenotypes under stabilizing selection
• Isolated singularities for the exponential type semilinear elliptic equation in ℝ²
• Effect of temporal fluctuation of selection coefficient on gene frequency in a population.

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