Efficient Markov Chain Monte Carlo Methods for Decoding Neural Spike Trains

DOI10.1162/NECO_a_00059zbMath1217.92022OpenAlexW2126334242WikidataQ38255516 ScholiaQ38255516MaRDI QIDQ3070781

Yashar Ahmadian, Jonathan W. Pillow, Liam Paninski

Publication date: 26 January 2011

Published in: Neural Computation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1162/neco_a_00059

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Generalized linear models (logistic models) (62J12) Monte Carlo methods (65C05) Neural biology (92C20) Numerical analysis or methods applied to Markov chains (65C40)

Related Items (11)

Precomputing strategy for Hamiltonian Monte Carlo method based on regularity in parameter space ⋮ Sampling Constrained Probability Distributions Using Spherical Augmentation ⋮ A Bayesian approach for inferring neuronal connectivity from calcium fluorescent imaging data ⋮ A Transition to Sharp Timing in Stochastic Leaky Integrate-and-Fire Neurons Driven by Frozen Noisy Input ⋮ Dynamics and spike trains statistics in conductance-based integrate-and-fire neural networks with chemical and electric synapses ⋮ Spatio-temporal spike train analysis for large scale networks using the maximum entropy principle and Monte Carlo method ⋮ Capturing Spike Variability in Noisy Izhikevich Neurons Using Point Process Generalized Linear Models ⋮ Model-Based Decoding, Information Estimation, and Change-Point Detection Techniques for Multineuron Spike Trains ⋮ Unnamed Item ⋮ Unnamed Item ⋮ Unnamed Item

Uses Software

• tsbridge

Cites Work

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• Parameterization and Bayesian Modeling

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