A General Framework for Weighted Gene Co-Expression Network Analysis

From MaRDI portal
Revision as of 05:39, 7 March 2024 by Import240305080351 (talk | contribs) (Created automatically from import240305080351)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Publication:5700521


DOI10.2202/1544-6115.1128zbMath1077.92042WikidataQ29617580 ScholiaQ29617580MaRDI QIDQ5700521

Steve Horvath, Bin Zhang

Publication date: 28 October 2005

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: http://www.bepress.com/sagmb/vol4/iss1/art17


92C50: Medical applications (general)

92C40: Biochemistry, molecular biology

92D10: Genetics and epigenetics


Related Items

Unnamed Item, Multiple Response Regression for Gaussian Mixture Models with Known Labels, TGCnA: temporal gene coexpression network analysis using a low-rank plus sparse framework, The cluster correlation-network support vector machine for high-dimensional binary classification, Structure of triadic relations in multiplex networks, Preserving positivity for rank-constrained matrices, Comparison of Different Generalizations of Clustering Coefficient and Local Efficiency for Weighted Undirected Graphs, Functions preserving positive definiteness for sparse matrices, Efficient computation of the Weighted Clustering Coefficient, Network-based survival analysis to discover target genes for developing cancer immunotherapies and predicting patient survival, A Compound Decision Approach to Covariance Matrix Estimation, On Joint Estimation of Gaussian Graphical Models for Spatial and Temporal Data, Matrix positivity preservers in fixed dimension. I, Sparse factor model for co-expression networks with an application using prior biological knowledge, Identification of consistent functional genetic modules, Clustering of high throughput gene expression data, A method for generating realistic correlation matrices, Retaining positive definiteness in thresholded matrices, Complete characterization of Hadamard powers preserving Loewner positivity, monotonicity, and convexity, The sparse Laplacian shrinkage estimator for high-dimensional regression, Tree-guided group lasso for multi-response regression with structured sparsity, with an application to eQTL mapping, Local dependency in networks, Critical exponents of graphs, Network assisted analysis to reveal the genetic basis of autism, Statistical analysis of weighted networks, Simulating weighted, directed small-world networks, On dynamic network security: a random decentering algorithm on graphs, Investigating the relationship between \(k\)-core and \(s\)-core network decompositions, Sequential double cross-validation for assessment of added predictive ability in high-dimensional omic applications, Nonparametric Bayesian learning of heterogeneous dynamic transcription factor networks, A network approach to quantifying radiotherapy effect on cancer: radiosensitive gene group centrality, Topology of whole-brain functional MRI networks: improving the truncated scale-free model, Robust network-based analysis of the associations between (epi)genetic measurements, Social cohesion, structural holes, and a tale of two measures, In defense of the indefensible: a very naïve approach to high-dimensional inference, Sparse Laplacian shrinkage with the graphical Lasso estimator for regression problems, Inference of genetic regulatory networks with regulatory hubs using vector autoregressions and automatic relevance determination with model selections, Optimal rates for community estimation in the weighted stochastic block model, Review on statistical methods for gene network reconstruction using expression data, A co-expression modules based gene selection for cancer recognition, Clustering coefficients of large networks, Asymptotic inference for high-dimensional data, Two-stage feature selection for classification of gene expression data based on an improved salp swarm algorithm, Partial correlation matrix estimation using ridge penalty followed by thresholding and re-estimation, Efficient Computation of the Weighted Clustering Coefficient, A panorama of positivity. II: Fixed dimension, Topology dependent epidemic spreading velocity in weighted networks