A statistical method for estimating the proportion of differentially expressed genes

DOI10.1016/J.COMPBIOLCHEM.2006.03.001MaRDI QIDQ2500377zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Yinglei Lai

Publication date 23 August 2006

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2006.03.001

zbMATH Keywords

LikelihoodMicroarrayProportion of true null hypotheses

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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Cites work

• A mixture model approach for the analysis of microarray gene expression data.
• Bootstrap methods: another look at the jackknife
• Estimating the dimension of a model
• scientific article; zbMATH DE number 3567782 (Why is no real title available?)
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• scientific article; zbMATH DE number 1059776 (Why is no real title available?)
• Statistical significance for genomewide studies

Cited in

(10)

• Comparison of various statistical methods for identifying differential gene expression in replicated microarray data
• An Enhanced Quantile Approach for Assessing Differential Gene Expressions
• scientific article; zbMATH DE number 5347347 (Why is no real title available?)
• A likelihood ratio test for the proportion of non-differentially expressed genes
• scientific article; zbMATH DE number 1750184 (Why is no real title available?)
• Estimating the number of genes that are differentially expressed in both of two independent experiments
• scientific article; zbMATH DE number 7448521 (Why is no real title available?)
• Improved statistical tests for differential gene expression by shrinking variance components estimates
• Accurate Ranking of Differentially Expressed Genes by a Distribution-Free Shrinkage Approach
• Testing prediction algorithms as null hypotheses: application to assessing the performance of deep neural networks

Describes a project that uses

Uses Software

• impute

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