Improved statistical tests for differential gene expression by shrinking variance components estimates
From MaRDI portal
Recommendations
- A new efficient statistical test for detecting variability in the gene expression data
- Shrunken p‐Values for Assessing Differential Expression with Applications to Genomic Data Analysis
- A family of flexible shrinkage estimators for the variances of high-dimensional gene expressions
- Shrinkage estimation of effect sizes as an alternative to hypothesis testing followed by estimation in high-dimensional biology: applications to differential gene expression
- Identifying differentially expressed genes in microarray experiments with model-based variance estimation
- Optimal tests shrinking both means and variances applicable to microarray data analysis
- A statistical method for estimating the proportion of differentially expressed genes
- Assessing Differential Gene Expression with Small Sample Sizes in Oligonucleotide Arrays Using a Mean‐Variance Model
- An Enhanced Quantile Approach for Assessing Differential Gene Expressions
- Nonparametric estimation of genewise variance for microarray data
Cited in
(49)- Shrinkage estimation of effect sizes as an alternative to hypothesis testing followed by estimation in high-dimensional biology: applications to differential gene expression
- Optimal tests shrinking both means and variances applicable to microarray data analysis
- Lopsided reasoning on lopsided tests and multiple comparisons
- Control charts for mean under shrinkage technique
- Variance estimation in the analysis of microarray data
- Tilting methods for assessing the influence of components in a classifier
- Robust hyperparameter estimation protects against hypervariable genes and improves power to detect differential expression
- Modified test statistics by inter-voxel variance shrinkage with an application to f MRI
- Randomization Tests for Small Samples: An Application for Genetic Expression Data
- Computational Biology: Toward Deciphering Gene Regulatory Information in Mammalian Genomes
- An Enhanced Quantile Approach for Assessing Differential Gene Expressions
- Empirical Bayes Confidence Intervals Shrinking Both Means and Variances
- A new efficient statistical test for detecting variability in the gene expression data
- SHRINKAGE, PRETEST AND ABSOLUTE PENALTY ESTIMATORS IN PARTIALLY LINEAR MODELS
- James-Stein type estimators of variances
- Variance model selection with application to joint analysis of multiple microarray datasets under false discovery rate control
- Robust semiparametric optimal testing procedure for multiple normal means
- Linear combination test for hierarchical gene set analysis
- Fully moderated \(t\)-statistic for small sample size gene expression arrays
- Borrowing information across genes and experiments for improved error variance estimation in microarray data analysis
- Applying shrinkage variance estimators to the TOST test in high dimensional settings
- Empirical and fully Bayesian approaches for random effects models in microarray data analysis
- A family of flexible shrinkage estimators for the variances of high-dimensional gene expressions
- Evaluation of Laplace distribution-based ANOVA models applied to microarray data
- Estimating the proportion of true null hypotheses using the pattern of observed \(p\)-values
- Asymptotically optimal shrinkage estimates for non-normal data
- Optimal Shrinkage Estimation of Variances With Applications to Microarray Data Analysis
- Empirical Bayes Confidence Intervals for Selected Parameters in High-Dimensional Data
- Maximum Average-Power (MAP) Tests
- Assessing Differential Gene Expression with Small Sample Sizes in Oligonucleotide Arrays Using a Mean‐Variance Model
- Sharp Simultaneous Confidence Intervals for the Means of Selected Populations with Application to Microarray Data Analysis
- Accurate Ranking of Differentially Expressed Genes by a Distribution-Free Shrinkage Approach
- Sample size calculation for a regularized \(t\)-statistic in microarray experiments
- Shrinkage-based similarity metric for cluster analysis of microarray data
- Functional Hierarchical Models for Identifying Genes with Different Time‐Course Expression Profiles
- Shrinkage-based diagonal discriminant analysis and its applications in high-dimensional data
- Nonparametric estimation of genewise variance for microarray data
- Regularized t t distribution: definition, properties, and applications
- An adaptively weighted statistic for detecting differential gene expression when combining multiple transcriptomic studies
- A comparison of methods for estimating the determinant of high-dimensional covariance matrix
- Joint adaptive mean-variance regularization and variance stabilization of high dimensional data
- A new family of distribution-free geometric shrinkage variances estimators with applications
- Empirical partially Bayes multiple testing and compound ^2 decisions
- The importance of distinct modeling strategies for gene and gene-specific treatment effects in hierarchical models for microarray data
- Laplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experiments
- Testing significance of features by lassoed principal components
- Assumption adequacy averaging as a concept for developing more robust methods for differential gene expression analysis
- A structural mixed model to shrink covariance matrices for time-course differential gene expression studies
- A flexible approximate likelihood ratio test for detecting differential expression in microarray data
This page was built for publication: Improved statistical tests for differential gene expression by shrinking variance components estimates
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5313574)
