Empirical and fully Bayesian approaches for random effects models in microarray data analysis

DOI10.1177/1471082X1001100105MaRDI QIDQ4970596zbMATH OpenFDO

Authors Haim Y. Bar, Elizabeth D. Schifano

Publication date 7 October 2020

Published in Statistical Modelling (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1177/1471082X1001100105

zbMATH Keywords

EM algorithmlinear modelMCMCLaplace approximationempirical BayesLEMMA

Mathematics Subject Classification ID

Statistics (62-XX)

Recommendations

• Adjusting batch effects in microarray expression data using empirical Bayes methods
• Empirical Bayes analysis of unreplicated microarray data
• Empirical Bayes Analysis of a Microarray Experiment
• Statistical analysis of microarray data: a Bayesian approach
• Bayesian analysis of comparative microarray experiments by model averaging
• A Bayesian approach to assessing differential expression of microarray data
• An empirical Bayes' approach to joint analysis of multiple microarray gene expression studies
• Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments

Cites work

• scientific article; zbMATH DE number 1750180 (Why is no real title available?)
• scientific article; zbMATH DE number 1911984 (Why is no real title available?)
• Hierarchical Bayes models for cDNA microarray gene expression
• Improved statistical tests for differential gene expression by shrinking variance components estimates
• Laplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experiments
• Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments
• Microarrays, empirical Bayes and the two-groups model

Cited in

(3)

• Learning from a lot: empirical Bayes for high-dimensional model-based prediction
• Differential variation and expression analysis
• A probabilistic framework for microarray data analysis: fundamental probability models and statistical inference

Describes a project that uses

Uses Software

• lemma
• locfdr
• BayesDA
• limma
• WinBUGS

This page was built for publication: Empirical and fully Bayesian approaches for random effects models in microarray data analysis

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q4970596)