A flexible approximate likelihood ratio test for detecting differential expression in microarray data

DOI10.1016/J.CSDA.2009.03.022MaRDI QIDQ961838zbMATH OpenOpenAlexFDO

Authors Ahmed Hossain, Joseph Beyene, Andrew R. Willan, Pingzhao Hu

Publication date 1 April 2010

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2009.03.022

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

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Cites work

• A Laplace mixture model for identification of differential expression in microarray experiments
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• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
• Empirical Bayes Analysis of a Microarray Experiment
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• scientific article; zbMATH DE number 1750180 (Why is no real title available?)
• scientific article; zbMATH DE number 2202354 (Why is no real title available?)
• Improved statistical tests for differential gene expression by shrinking variance components estimates
• Inference for the Type II generalized logistic distribution under progressive Type II censoring
• Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments
• Multiple Testing. Part I. Single-Step Procedures for Control of General Type I Error Rates
• Resampling-based false discovery rate controlling multiple test procedures for correlated test statistics.
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Cited in

(6)

• scientific article; zbMATH DE number 5721727 (Why is no real title available?)
• A new efficient statistical test for detecting variability in the gene expression data
• A likelihood ratio test for the proportion of non-differentially expressed genes
• ExactDAS: an exact test procedure for the detection of differential alternative splicing in microarray experiments
• Empirical null distribution-based modeling of multi-class differential gene expression detection
• Application of skew-normal distribution for detecting differential expression to microRNA data

Describes a project that uses

Uses Software

• GEST
• affy
• SAM

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