CERENA
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Cited in
(29)- Method of conditional moments (MCM) for the chemical master equation
- Jump-Diffusion Approximation of Stochastic Reaction Dynamics: Error Bounds and Algorithms
- Integration based profile likelihood calculation for PDE constrained parameter estimation problems
- Computational identification of irreducible state-spaces for stochastic reaction networks
- Reconstructing the hidden states in time course data of stochastic models
- Approximation and inference methods for stochastic biochemical kinetics -- a tutorial review
- Automated generation of conditional moment equations for stochastic reaction networks
- Stochastic hybrid models of gene regulatory networks -- a PDE approach
- Hybrid framework for the simulation of stochastic chemical kinetics
- StochKit
- STOCHSIMGPU
- StochSens
- StochKit2
- StochDynTools
- iNA
- HRSSA
- SHAVE
- SYNBADm
- CaliBayes
- MEANS
- LNA++
- SteadyCellPhenotype
- Compartor
- MomentClosure.jl
- Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks
- Robust calibration of hierarchical population models for heterogeneous cell populations
- Model checking Markov population models by stochastic approximations
- Stochastic modeling and numerical simulation of gene regulatory networks with protein bursting
- LNA++: linear noise approximation with first and second order sensitivities
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