CONTRAlign: Discriminative Training for Protein Sequence Alignment

DOI10.1007/11732990_15MaRDI QIDQ3596279zbMATH OpenOpenAlexFDO

Authors Chuong B. do, Samuel S. Gross, Serafim Batzoglou

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_15

zbMATH Keywords

CONTRAlignprotein sequence alignmentsecondary structure

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

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Cited in

(7)

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• A sum-over-paths extension of edit distances accounting for all sequence alignments

Describes a project that uses

Uses Software

• MAFFT
• CONTRAlign

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