Characterizing the micronuclear gene patterns in ciliates

DOI10.1007/S00224-002-1043-9MaRDI QIDQ699814zbMATH OpenOpenAlexFDO

Authors Andrzej Ehrenfeucht, Ion Petre, Grzegorz Rozenberg, Tero Harju

Publication date 25 September 2002

Published in Theory of Computing Systems (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00224-002-1043-9

zbMATH Keywords

gene assembly in ciliatesDNA processing

Mathematics Subject Classification ID

Computing methodologies and applications (68U99) Searching and sorting (68P10)

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• Combining overlap and containment for gene assembly in ciliates
• Sorting by reversals and the theory of 4-regular graphs
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• A model for the origin of internal eliminated segments (IESs) and gene rearrangement in stichotrichous ciliates
• Sorting permutations: games, genomes, and cycles
• Parallelism in gene assembly
• REDUCTION GRAPHS FROM OVERLAP GRAPHS FOR GENE ASSEMBLY IN CILIATES
• Simple Operations for Gene Assembly
• Quantifying CDS sortability of permutations by strategic pile size
• Recombination faults in gene assembly in ciliates modeled using multimatroids

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