iRNA-AI

swMATH24437MaRDI QIDQ36195FDOQ36195

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Official website: https://www.ncbi.nlm.nih.gov/pubmed/27926534

Cited In (only showing first 100 items - show all)

• Identifying N\(^6\)-methyladenosine sites using extreme gradient boosting system optimized by particle swarm optimizer
• SPrenylC-PseAAC: a sequence-based model developed via Chou's 5-steps rule and general PseAAC for identifying S-prenylation sites in proteins
• Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components
• Prediction of interface residue based on the features of residue interaction network
• Bi-PSSM: position specific scoring matrix based intelligent computational model for identification of mycobacterial membrane proteins
• The preliminary efficacy evaluation of the CTLA-4-ig treatment against lupus nephritis through \textit{in-silico} analyses
• hCKSAAP_UbSite
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• Large-scale frequent stem pattern mining in RNA families
• \textit{In silico} analysis of \textit{plasmodium falciparum} CDPK5 protein through molecular modeling, docking and dynamics
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
• pSSbond-PseAAC: prediction of disulfide bonding sites by integration of PseAAC and statistical moments
• Sequence-based discrimination of protein-RNA interacting residues using a probabilistic approach
• Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
• Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC
• IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
• Highly accurate prediction of protein self-interactions by incorporating the average block and PSSM information into the general PseAAC
• Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
• RNAforester
• Acalpred
• pSuc-Lys
• DISOPRED
• DNdisorder
• Wenxiang
• CMfinder
• iEnhancer-2L
• 2D-MH
• FreeSASA
• AFP-Pred
• iDNA-Prot
• iDrug-Target
• iDNA-Methyl
• iPro54-PseKNC
• iPPI-Esml
• iPPBS-Opt
• iSuc-PseOpt
• iRSpot-PseDNC
• iSNO-AAPair
• Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC
• Pse-in-One
• ngLOC
• Prnam-PC
• CCP4
• DORAEMON
• Pse-analysis
• iACP
• iCar-PseCp
• iHyd-PseCp
• iPTM-mLys
• iPhos-PseEvo
• iOri-Human
• pSumo-CD
• RVMAB
• iRNA-PseColl
• iATC-mHyb
• iRNA-2methyl
• iRNAm5C-PseDNC
• iPreny-PseAAC
• pLoc-mAnimal
• pLoc-mVirus
• pLoc-mEuk
• DPP-PseAAC
• POSSUM
• iRSpot-EL
• iPromoter-2L
• iHSP-PseRAAAC
• iKcr-PseEns
• iRSpot-GAEnsC
• iTIS-PseKNC
• OOgenesis_Pred
• PINGU
• PREvaIL
• MitProt-Pred
• pLoc-mGneg
• pLoc-mPlant
• iNuc-STNC
• iROS-gPseKNC
• NRPSpredictor2
• Gneg-mPLoc
• Unb-DPC
• 2L-piRNA
• BlaPred
• iProt-Sub
• iDNA6mA-PseKNC
• iRNA-PseU
• iPPI-PseAAC
• iRO-3wPseKNC
• pLoc-mHum
• pLoc_bal-mHum
• pLoc_bal-mGpos
• pLoc_bal-mGneg
• dbPTM
• PROSPERous
• ESA-UbiSite
• iDNA4mC
• OnD-CRF
• RBSURFpred
• NETASA

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