Likelihood calculation in molecular phylogenetics
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(14)- Phylogenetic estimation with partial likelihood tensors
- Markov invariants, plethysms, and phylogenetics
- Approximating likelihoods under low but variable rates across sites
- An extended model for phylogenetic maximum likelihood based on discrete morphological characters
- Additional analytical support for a new method to compute the likelihood of diversification models
- The shape of the one-dimensional phylogenetic likelihood function
- Information geometry for phylogenetic trees
- Parsimony and the rank of a flattening matrix
- Phylogenetic Inference: Linear Invariants and Maximum Likelihood
- An algebraic analysis of the two state Markov model on tripod trees
- Hessian calculation for phylogenetic likelihood based on the pruning algorithm and its applications
- A representation-theoretic approach to the calculation of evolutionary distance in bacteria
- Maximum Likelihood for Genome Phylogeny on Gene Content
- Hadamard phylogenetic methods and the \(n\)-taxon process
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