Phylogenetic Inference: Linear Invariants and Maximum Likelihood

DOI10.2307/2532566MaRDI QIDQ4274337zbMATH OpenOpenAlexWikidataFDO

Authors

Publication date 2 February 1994

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.2307/2532566

zbMATH Keywords

likelihood ratio testphylogenetic inferenceparameter constraintsmaximum likelihood techniquelinear invariantsidentical evolutionary processesnucleic acid sequencing

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10) Problems related to evolution (92D15)

Recommendations

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Cited in

(25)

• Phylogenetic estimation with partial likelihood tensors
• Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts
• Revisiting an equivalence between maximum parsimony and maximum likelihood methods in phylogenetics
• Maximum Likelihood for Genome Phylogeny on Gene Content
• Construction of linear invariants in phylogenetic inference
• New Methods for Detecting Lineage-Specific Selection
• Relevant phylogenetic invariants of evolutionary models
• Statistical Inference in Evolutionary Models of DNA Sequences via the EM Algorithm
• Hessian calculation for phylogenetic likelihood based on the pruning algorithm and its applications
• Testing for phylogenetic signal in phenotypic traits: new matrices of phylogenetic proximities
• Necessary conditions for the method of inferring phylogeny by linear invariants
• Likelihood calculation in molecular phylogenetics
• Links between maximum likelihood and maximum parsimony under a simple model of site substitution
• Developing a statistically powerful measure for quartet tree inference using phylogenetic identities and Markov invariants
• The shape of the one-dimensional phylogenetic likelihood function
• Bootstrapping a method of phylogenetic inference
• Consistency of Bayesian inference of resolved phylogenetic trees
• No BLUE among phylogenetic estimators
• Comparing the likelihood functions of phylogenetic trees
• scientific article; zbMATH DE number 2220791 (Why is no real title available?)
• Combinatorial Pattern Matching
• Phylogenetic Ornstein-Uhlenbeck regression curves
• Evaluation of the relative performance of the subflattenings method for phylogenetic inference
• Probabilistic models in cluster analysis
• Phylogenetic mixtures and linear invariants for equal input models

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