Minfi
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swMATH23478MaRDI QIDQ35251FDOQ35251
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Official website: http://bioconductor.org/packages/release/bioc/html/minfi.html
Cited In (34)
- methylGSA
- \texttt{MLML2R}: an R package for maximum likelihood estimation of DNA methylation and hydroxymethylation proportions
- Testing differentially methylated regions through functional principal component analysis
- Identifying intergenerational patterns of correlated methylation sites
- Comparing five statistical methods of differential methylation identification using bisulfite sequencing data
- Estimating DNA methylation levels by joint modeling of multiple methylation profiles from microarray data
- GBSA
- cghseg
- SolexaQA
- BEAT
- BSmooth
- Bisulfighter
- DMAP
- HMM-DM
- methylKit
- MethylSig
- MOABS
- RRBSMAP
- SAAP-RRBS
- IMA
- TileQC
- HMM-Fisher
- MethPipe
- MLML2R
- MLML
- OxyBS
- methyAnalysis
- ChAMP
- FastDMA
- PINCAGE
- MethylCoder
- HMM-Fisher: identifying differential methylation using a hidden Markov model and Fisher's exact test
- \texttt{EBADIMEX}: an empirical Bayes approach to detect joint differential expression and methylation and to classify samples
- Selection-corrected statistical inference for region detection with high-throughput assays
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