Minfi
From MaRDI portal
Cited in
(34)- cghseg
- Identifying intergenerational patterns of correlated methylation sites
- \texttt{EBADIMEX}: an empirical Bayes approach to detect joint differential expression and methylation and to classify samples
- \texttt{MLML2R}: an R package for maximum likelihood estimation of DNA methylation and hydroxymethylation proportions
- SolexaQA
- HMM-Fisher: identifying differential methylation using a hidden Markov model and Fisher's exact test
- Comparing five statistical methods of differential methylation identification using bisulfite sequencing data
- methylKit
- BEAT
- TileQC
- BSmooth
- MethylSig
- Bisulfighter
- RRBSMAP
- HMM-DM
- DMAP
- MOABS
- SAAP-RRBS
- IMA
- HMM-Fisher
- OxyBS
- MLML2R
- MLML
- MethPipe
- methyAnalysis
- ChAMP
- PINCAGE
- FastDMA
- MethylCoder
- Selection-corrected statistical inference for region detection with high-throughput assays
- Estimating DNA methylation levels by joint modeling of multiple methylation profiles from microarray data
- Testing differentially methylated regions through functional principal component analysis
- GBSA
- methylGSA
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