HMM-Fisher

MaRDI QIDQ40483swMATHFDO

Official website https://www.ncbi.nlm.nih.gov/pubmed/26854292

Source code repository https://github.com/xxy39/HMM-Fisher

Described by source

• HMM-Fisher: identifying differential methylation using a hidden Markov model and Fisher's exact test

Cited in

(25)

• MethCP: differentially methylated region detection with change point models
• Comparing five statistical methods of differential methylation identification using bisulfite sequencing data
• SolexaQA
• BEAT
• BS Seeker
• BSmooth
• BISMA
• Bisulfighter
• COHCAP
• DMAP
• HMM-DM
• methylKit
• Minfi
• MethylSig
• MOABS
• PASS-bis
• RRBSMAP
• SAAP-RRBS
• IMA
• TileQC
• MethCP
• metilene
• methyAnalysis
• MethylCoder
• HMM-DM: identifying differentially methylated regions using a hidden Markov model

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