BS Seeker
From MaRDI portal
Cited in
(62)- On the average-case complexity of pattern matching with wildcards
- FASTX
- SolexaQA
- SHRiMP
- HMM-Fisher: identifying differential methylation using a hidden Markov model and Fisher's exact test
- HMM-DM: identifying differentially methylated regions using a hidden Markov model
- Bioinformatics for high throughput sequencing
- Error correction in methylation profiling from NGS bisulfite protocols
- Comparative assessment of alignment algorithms for NGS data: features, considerations, implementations, and future
- HIVE-hexagon
- starBase
- methylKit
- BEAT
- TileQC
- BSmooth
- Bismark
- PASS-bis
- MethylSig
- BISMA
- Bisulfighter
- RRBSMAP
- HMM-DM
- DMAP
- MOABS
- SAAP-RRBS
- COHCAP
- BSMAP
- IMA
- VarScan
- HMM-Fisher
- HMMSplicer
- BayesCall
- BING
- QSRA
- SHARCGS
- mrsFAST
- FindPeaks
- HPeak
- MiRFinder
- DIANA-mirExTra
- miRanalyzer
- MiPred
- MiRonTop
- ProMiR II
- SeqBuster
- PatMaN
- miRNAkey
- TargetSpy
- miRExpress
- mirTools
- CLIPZ
- DWE
- SpliceTrap
- methyAnalysis
- CUSHAW
- Socrates
- MAP-RSeq
- Pash
- CAP-miRSeq
- PSAR-Align
- BatMeth
- MethylCoder
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