Minimal output sets for identifiability

DOI10.1016/J.MBS.2012.04.005MaRDI QIDQ453076zbMATHOpenAlexWikidataFDO

Authors Milena Anguelova, Johan Karlsson, Mats Jirstrand

Publication date 18 September 2012

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2012.04.005

zbMATH Keywords

experimental designnonlinear systemsobservabilityLie point symmetriessignalling pathwaysstructural identifiability

Mathematics Subject Classification ID

Inverse problems involving ordinary differential equations (34A55) General biology and biomathematics (92B05) System identification (93B30)

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Cites work

• scientific article; zbMATH DE number 4049588 (Why is no real title available?)
• A probabilistic algorithm to test local algebraic observability in polynomial time
• Differential algebra methods for the study of the structural identifiability of rational function state-space models in the biosciences
• Exploration of the intercellular heterogeneity of topotecan uptake into human breast cancer cells through compartmental modelling
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• Fully parallel 3D thinning algorithms based on sufficient conditions for topology preservation
• Graph theory
• Mathematical biology. Vol. 1: An introduction.
• Mathematical model of NF-\( \kappa\)B regulatory module
• Minimal output sets for identifiability
• Nonlinear controllability and observability
• Parameter identifiability of nonlinear systems: The role of initial conditions.
• Reduction of Algebraic Parametric Systems by Rectification of Their Affine Expanded Lie Symmetries
• Similarity transformation approach to identifiability analysis of nonlinear compartmental models
• Structural identifiability analysis via symmetries of differential equations
• System identifiability based on the power series expansion of the solution

Cited in

(16)

• Determining identifiable parameter combinations using subset profiling
• AutoRepar: A method to obtain identifiable and observable reparameterizations of dynamic models with mechanistic insights
• Experimental design for parameter estimation in steady-state linear models of metabolic networks
• Calculating all multiple parameter solutions of ODE models to avoid biological misinterpretations
• A fast algorithm to assess local structural identifiability
• Identifiability of linear compartmental tree models and a general formula for input-output equations
• Identifiability results for several classes of linear compartment models
• Robust global identifiability theory using potentials -- application to compartmental models
• Identifiability of infection model parameters early in an epidemic
• A confidence building exercise in data and identifiability: modeling cancer chemotherapy as a case study
• A systematic approach for doing an a priori identifiability study of dynamical nonlinear models
• Cellular signaling identifiability analysis: a case study
• An efficient procedure to assist in the re-parametrization of structurally unidentifiable models
• Linear compartmental models: input-output equations and operations that preserve identifiability
• Identifiability from a few species for a class of biochemical reaction networks
• Minimal output sets for identifiability

Describes a project that uses

Uses Software

• Mathematica
• ObservabilityTest

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