Recombination as a point process along sequences

DOI10.1006/tpbi.1998.1403zbMath0923.92015OpenAlexW1984324163WikidataQ52212352 ScholiaQ52212352MaRDI QIDQ1296932

Carsten Wiuf, Jotun J. Hein

Publication date: 3 August 1999

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://semanticscholar.org/paper/b3baad11568f40f2182c6362d49e9d29f330f43f

zbMATH Keywords

algorithmcoalescencerecombinations

Mathematics Subject Classification ID

Problems related to evolution (92D15) Point processes (e.g., Poisson, Cox, Hawkes processes) (60G55) Computational methods for problems pertaining to biology (92-08)

Related Items (18)

Asymptotic results concerning the total branch length of the Bolthausen-Sznitman coalescent ⋮ The distribution of surviving blocks of an ancestral genome ⋮ Modeling the effect of inbreeding among founders in linkage analysis ⋮ Evolution of the ancestral recombination graph along the genome in case of selective sweep ⋮ Developments in coalescent theory from single loci to chromosomes ⋮ Sequential Markov coalescent algorithms for population models with demographic structure ⋮ Markov jump processes in modeling coalescent with recombination ⋮ The tree length of an evolving coalescent ⋮ A renewal theory approach to IBD sharing ⋮ Computing the joint distribution of the total tree length across loci in populations with variable size ⋮ A non-zero variance of Tajima's estimator for two sequences even for infinitely many unlinked loci ⋮ On the joint distribution of tree height and tree length under the coalescent ⋮ Markovian approximation to the finite loci coalescent with recombination along multiple sequences ⋮ Genealogical distances under low levels of selection ⋮ Editorial: Coalescent theory has many new branches ⋮ A sequentially Markov conditional sampling distribution for structured populations with migration and recombination ⋮ Coalescent simulation in continuous space: algorithms for large neighbourhood size ⋮ The distribution of waiting distances in ancestral recombination graphs

Cites Work

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• Line-of-descent and genealogical processes, and their applications in population genetics models
• On the two-locus sampling distribution
• The use of sample genealogies for studying a selectively neutral m-loci model with recombination
• The coalescent
• On the number of segregating sites in genetical models without recombination
• Properties of a neutral allele model with intragenic recombination

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