Identification of almost invariant aggregates in reversible nearly uncoupled Markov chains
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Cites work
- scientific article; zbMATH DE number 1595164 (Why is no real title available?)
- scientific article; zbMATH DE number 420886 (Why is no real title available?)
- scientific article; zbMATH DE number 3760340 (Why is no real title available?)
- scientific article; zbMATH DE number 854567 (Why is no real title available?)
- scientific article; zbMATH DE number 854710 (Why is no real title available?)
- A direct approach to conformational dynamics based on hybrid Monte Carlo
- ARPACK Users' Guide
- Computational molecular dynamics: challenges, methods, ideas. Proceedings of the 2nd international symposium on Algorithms for Macromolecular modelling, Berlin, Germany, May 21--24, 1997
- Non-negative matrices and Markov chains. 2nd ed
- On the structure of stochastic matrices with a subdominant eigenvalue near 1
- Perturbation theory for linear operators.
- Stochastic Complementation, Uncoupling Markov Chains, and the Theory of Nearly Reducible Systems
Cited in
(56)- A combinatorial approach to nearly uncoupled Markov chains. I: Reversible Markov chains
- Multiplicative ergodic theorems for transfer operators: towards the identification and analysis of coherent structures in non-autonomous dynamical systems
- Extracting macroscopic stochastic dynamics: Model problems
- Robust Perron cluster analysis in conformation dynamics
- A SPECTRAL METHOD FOR AGGREGATING VARIABLES IN LINEAR DYNAMICAL SYSTEMS WITH APPLICATION TO CELLULAR AUTOMATA RENORMALIZATION
- Optimal Kullback-Leibler approximation of Markov chains via nuclear norm regularisation
- A probabilistic algorithm for aggregating vastly undersampled large Markov chains
- Almost-invariant sets and invariant manifolds - connecting probabilistic and geometric descriptions of coherent structures in flows
- Waiting time distributions for clusters of IP\(_3\) receptors
- Optimal Reaction Coordinates: Variational Characterization and Sparse Computation
- Local expansion concepts for detecting transport barriers in dynamical systems
- Optimal partition and effective dynamics of complex networks
- Near invariance and local transience for random diffeomorphisms
- ATLAS: a geometric approach to learning high-dimensional stochastic systems near manifolds
- Understanding the geometry of transport: diffusion maps for Lagrangian trajectory data unravel coherent sets
- Clusters in Markov chains via singular vectors of Laplacian matrices
- Towards effective dynamics in complex systems by Markov kernel approximation
- A dynamic Laplacian for identifying Lagrangian coherent structures on weighted Riemannian manifolds
- Robust FEM-based extraction of finite-time coherent sets using scattered, sparse, and incomplete trajectories
- A review of Girsanov reweighting and of square root approximation for building molecular Markov state models
- Phase transitions and metastability in Markovian and molecular systems
- A geometric heat-flow theory of Lagrangian coherent structures
- Finite-time entropy: a probabilistic approach for measuring nonlinear stretching
- Load balancing for Markov chains with a specified directed graph
- Computing the Minimal Rebinding Effect Included in a Given Kinetics
- Information theory, model error, and predictive skill of stochastic models for complex nonlinear systems
- Identifying finite-time coherent sets from limited quantities of Lagrangian data
- Clustering behaviour in Markov chains with eigenvalues close to one
- Statistically optimal almost-invariant sets
- Blockwise perturbation theory for nearly uncoupled Markov chains and its application
- Markov model theory
- Stochastic matrices realising the boundary of the Karpelevič region
- Optimal control of molecular dynamics using Markov state models
- Coherent sets for nonautonomous dynamical systems
- Modularity revisited: a novel dynamics-based concept for decomposing complex networks
- ON MARKOV CHAINS AND THE SPECTRA OF THE CORRESPONDING FROBENIUS–PERRON OPERATORS
- Spectral analysis of weighted Laplacians arising in data clustering
- Finding metastabilities in reversible Markov chains based on incomplete sampling
- scientific article; zbMATH DE number 7365760 (Why is no real title available?)
- A new criterion and method for amino acid classification
- Fuzzy spectral clustering by PCCA+: application to Markov state models and data classification
- A comparative study of two stochastic mode reduction methods
- Leveraging Bayesian analysis to improve accuracy of approximate models
- Linearly scalable learning of smooth low-dimensional patterns with permutation-aided entropic dimension reduction
- Oja's algorithm for graph clustering, Markov spectral decomposition, and risk sensitive control
- Mixed-integer programming for cycle detection in nonreversible Markov processes
- Generator estimation of Markov jump processes
- Hierarchical kernel spectral clustering
- Identifying almost invariant sets in stochastic dynamical systems
- Absolute flux optimising curves of flows on a surface
- Pseudogenerators of spatial transfer operators
- How well-connected is the surface of the global Ocean?
- Finding dominant structures of nonreversible Markov processes
- Eigenvalue bounds on restrictions of reversible nearly uncoupled Markov chains
- Maximally predictive states: from partial observations to long timescales
- Spectral clustering for non-reversible Markov chains
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