Mathematical modeling of a minimal protocell with coordinated growth and division

DOI10.1016/J.JTBI.2009.06.001MaRDI QIDQ1625910zbMATH OpenOpenAlexWikidataFDO

Authors Ivan V. Surovtsev, Zhigang Zhang, Paul A. Lindahl, J. J. Morgan

Publication date 26 November 2018

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2009.06.001

zbMATH Keywords

\textit{in silico} cellautopoiesisbiochemical kineticscell cycleFtsZ ringminimal lifesynthetic cells

Mathematics Subject Classification ID

Cell biology (92C37) Biochemistry, molecular biology (92C40) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)

Recommendations

• Whole-cell modeling framework in which biochemical dynamics impact aspects of cellular geometry
• Protocell self-reproduction in a spatially extended metabolism-vesicle system
• Modelling protocells. The emergent synchronization of reproduction and molecular replication
• Necessary and sufficient conditions for protocell growth
• Phenotypic diversity and chaos in a minimal cell model

Cites work

• A framework for whole-cell mathematical modeling
• An abstract cell model that describes the self-organization of cell function in living systems
• Phenotypic diversity and chaos in a minimal cell model
• Protocell self-reproduction in a spatially extended metabolism-vesicle system
• Simulating, Analyzing, and Animating Dynamical Systems
• Whole-cell modeling framework in which biochemical dynamics impact aspects of cellular geometry

Cited in

(9)

• Modelling protocells. The emergent synchronization of reproduction and molecular replication
• A framework for whole-cell mathematical modeling
• Phenotypic diversity and chaos in a minimal cell model
• Protocell self-reproduction in a spatially extended metabolism-vesicle system
• Energetically plausible model of a self-maintaining protocellular system
• On necessary and sufficient conditions for proto-cell stationary growth
• Geometric analysis of the Goldbeter minimal model for the embryonic cell cycle
• Mathematical modelling of molecule evolution in protocells
• Necessary and sufficient conditions for protocell growth

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Uses Software

• XPPAUT

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