Simulating, Analyzing, and Animating Dynamical Systems
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(only showing first 100 items - show all)- Multistability of clustered states in a globally inhibitory network
- An alternative characterization of bit-sticking phenomena in a multi-degree-of-freedom controlled drillstring
- Bursting of Morris-Lecar neuronal model with current-feedback control
- Computational cell biology
- Equation-free analysis of agent-based models and systematic parameter determination
- The role of extracellular potassium dynamics in the different stages of ictal bursting and spreading depression: A computational study
- The effect of delayed host self-regulation on host-pathogen population cycles in forest insects
- Dynamics of excitable elements with time-delayed coupling
- Hopf bifurcation in the presomitic mesoderm during the mouse segmentation
- On immunotherapies and cancer vaccination protocols: a mathematical modelling approach
- Bistability in a model of mesoderm and anterior mesendoderm specification in \textit{Xenopus laevis}
- Mathematical modeling of a minimal protocell with coordinated growth and division
- Intermittency in the Hodgkin-Huxley model
- A mathematical model of recurrent spreading depolarizations
- Phase model-based neuron stabilization into arbitrary clusters
- Impact of parameter variability and environmental noise on the Klausmeier model of vegetation pattern formation
- Functional role of the activity of ATP-sensitive potassium channels in electrical behavior of hippocampal neurons: experimental and theoretical studies
- Co-existent activity patterns in inhibitory neuronal networks with short-term synaptic depression
- From coupled networks of systems to networks of states in phase space
- Phase models and clustering in networks of oscillators with delayed coupling
- Synchronization of weakly coupled canard oscillators
- A theory of synchrony by coupling through a diffusive chemical signal
- Greater accuracy and broadened applicability of phase reduction using isostable coordinates
- Phase-locking and bistability in neuronal networks with synaptic depression
- Convergent neuromodulation onto a network neuron can have divergent effects at the network level
- Modeling the effects of extracellular potassium on bursting properties in pre-Bötzinger complex neurons
- Weakly coupled oscillators in a slowly varying world
- Interaction between synaptic inhibition and glial-potassium dynamics leads to diverse seizure transition modes in biophysical models of human focal seizures
- Bifurcations of limit cycles in a reduced model of the Xenopus tadpole central pattern generator
- Analysis of heterogeneous cardiac pacemaker tissue models and traveling wave dynamics
- The role of positive feedback loops involving anti-dsDNA and anti-anti-dsDNA antibodies in autoimmune glomerulonephritis
- Control of clustered action potential firing in a mathematical model of entorhinal cortex stellate cells
- Cooperative differentiation through clustering in multicellular populations
- Cycling expression and cooperative operator interaction in the \(trp\) operon of \textit{Escherichia coli}
- A mathematical model of pulmonary gas exchange under inflammatory stress
- Mathematical modeling of energy consumption in the acute inflammatory response
- Signalling-modulated gene regulatory networks in early mammalian development
- Full system bifurcation analysis of endocrine bursting models
- Stochastic modelling of the eukaryotic heat shock response
- Balancing organization and flexibility in foraging dynamics
- Determining the contributions of divisive and subtractive feedback in the Hodgkin-Huxley model
- Locally optimal extracellular stimulation for chaotic desynchronization of neural populations
- Modeling immune complex-mediated autoimmune inflammation
- Phase reduction and phase-based optimal control for biological systems: a tutorial
- Optimal phase control of biological oscillators using augmented phase reduction
- Fast cheater migration stabilizes coexistence in a public goods dilemma on networks
- Sensitivity of the dynamics of the general Rosenzweig-Macarthur model to the mathematical form of the functional response: a bifurcation theory approach
- Complex oscillations and waves of calcium in pancreatic acinar cells
- XPPAUT
- Reduction of a model of an excitable cell to a one-dimensional map
- Dynamics in the 1:2 spatial resonance with broken reflection symmetry
- The influence of cytokinin-auxin cross-regulation on cell-fate determination in \textit{Arabidopsis thaliana} root development
- A frequency-domain method for solving linear time delay systems with constant coefficients
- Understanding cyclical thrombocytopenia: a mathematical modeling approach
- \textit{In vivo}, \textit{in vitro}, and \textit{in silico} studies suggest a conserved immune module that regulates malaria parasite transmission from mammals to mosquitoes
- Modeling of cancer virotherapy with recombinant measles viruses
- Chaos and hyperchaos in coupled antiphase driven Toda oscillators
- Multimodal regimes in a compartmental model of the dopamine neuron
- Predator-prey dynamics with square root functional responses
- Hopf bifurcation control via a dynamic state-feedback control
- Limits and dynamics of stochastic neuronal networks with random heterogeneous delays
- Analysis of a dengue disease model with nonlinear incidence
- The weakly nonlocal limit of a one-population Wilson-Cowan model
- Convergence analysis of a numerical method to solve the adjoint linearized periodic orbit equations
- Stability, bifurcation and phase-locking of time-delayed excitatory-inhibitory neural networks
- Stability analysis of regular and chaotic \(\mathrm{Ca^{2+}}\) oscillations in astrocytes
- Birth of oscillation in coupled non-oscillatory Rayleigh-Duffing oscillators
- Invasion dynamics in an intraguild predation system with predator-induced defense
- Mate limitation in fungal plant parasites can lead to cyclic epidemics in perennial host populations
- Optimal control policies of pests for hybrid dynamical systems
- Chaotic dynamics in a simple predator-prey model with discrete delay
- A general framework for validated continuation of periodic orbits in systems of polynomial ODEs
- A delay model for persistent viral infections in replicating cells
- Complex oscillatory patterns near singular Hopf bifurcation in a two-timescale ecosystem
- Host specialisation, immune cross-reaction and the composition of communities of co-circulating \textit{Borrelia} strains
- Network synchronization, stability and rhythmic processes in a diffusive mean-field coupled SEIR model
- Mathematical modeling of cerebral capillary blood flow heterogeneity and its effect on brain tissue oxygen levels
- Hopf and forward bifurcation of an integer and fractional-order SIR epidemic model with logistic growth of the susceptible individuals
- Big homoclinic orbit bifurcation underlying post-inhibitory rebound spike and a novel threshold curve of a neuron
- Dynamic behavior of an age-structured houseflies model with nonconstant fertility
- Frequency synchronization and excitabilities of two coupled heterogeneous Morris-Lecar neurons
- Pseudospectral methods for the stability analysis of delay equations. I: The infinitesimal generator approach
- Bifurcation analysis of 3D-PWS systems with two transversal switching boundaries: a case study in power electronics
- Continuation and bifurcation in nonlinear PDEs - algorithms, applications, and experiments
- Post inhibitory rebound spike related to nearly vertical nullcline for small homoclinic and saddle-node bifurcations
- Homeostasis in networks with multiple input nodes and robustness in bacterial chemotaxis
- Canard solutions in neural mass models: consequences on critical regimes
- Chemical oscillators synchronized via an active oscillating medium: dynamics and phase approximation model
- The nonlinear mechanisms underlying the various stochastic dynamics evoked from different bursting patterns in a neuronal model
- Computational analysis of a 9D model for a small DRG neuron
- Multistability, quasiperiodicity and chaos in a self-oscillating ring dynamical system with three degrees of freedom based on the van der Pol generator
- Mean-field dispersal induced synchrony and stability in an epidemic model under patchy environment
- Pattern formation in a spatially extended model of pacemaker dynamics in smooth muscle cells
- Estimation of the effect of magnetic field on a memristive neuron
- Prey-predator dynamics with adaptive protection mutualism
- The effect of characteristic times on collective modes of two quorum sensing coupled identical ring oscillators
- Dynamics of ramping bursts in a respiratory neuron model
- Emergence of stochastic resonance in a two-compartment hippocampal pyramidal neuron model
- The effects of background noise on a biophysical model of olfactory bulb mitral cells
- Evolutionary dynamics of rock-paper-scissors game in the patchy network with mutations
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