Computational cell biology
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Cited in
(85)- A regularization method for the parameter estimation problem in ordinary differential equations via discrete optimal control theory
- Pacer cell response to periodic Zeitgebers
- Optimal control and additive perturbations help in estimating ill-posed and uncertain dynamical systems
- A mathematical model for astrocytes mediated LTP at single hippocampal synapses
- A modelling framework describing the enzyme regulation of membrane lipids underlying gradient perception in \textit{Dictyostelium} cells II: input-output analysis
- Steady-state-preserving simulation of genetic regulatory systems
- Third-order memristive Morris-Lecar model of barnacle muscle fiber
- Robust master-slave synchronization of neuronal systems
- Biocomputing system of living cells
- Novel techniques in parameter estimation for fractional dynamical models arising from biological systems
- Modelling the coupling between intracellular calcium release and the cell cycle during cortical brain development
- Periods 1 + 2 imply chaos in steep or nonsmooth maps
- Are buffers boring? Uniqueness and asymptotical stability of traveling wave fronts in the buffered bistable system
- A conservative and monotone mixed-hybridized finite element approximation of transport problems in heterogeneous domains
- Synapses as stochastic concurrent systems
- Parameter estimation of ODE's via nonparametric estimators
- Analytical solution of linearized equations of the Morris-Lecar neuron model at large constant stimulation
- EXPLOITING OPTIMAL CONTROL FOR TARGET-ORIENTED MANIPULATION OF (BIO)CHEMICAL SYSTEMS: A MODEL-BASED APPROACH TO SPECIFIC MODIFICATION OF SELF-ORGANIZED DYNAMICS
- Controlling nonlinear waves in excitable media
- Computing rates of Markov models of voltage-gated ion channels by inverting partial differential equations governing the probability density functions of the conducting and non-conducting states
- Entrained collective rhythms of multicellular systems: partial impulsive control strategy
- Computational cell biology: second theme issue on ``computational biology
- Modeling secondary messenger pathways in neurovascular coupling
- A distributed parameter identification problem in neuronal cable theory models
- Efficient exponential methods for genetic regulatory systems
- An efficient method for simulation of noisy coupled multi-dimensional oscillators
- On the coherent behavior of pancreatic beta cell clusters
- Hopf bifurcation analysis for models on genetic negative feedback loops
- Into higher dimensions for nonsmooth dynamical systems
- Where do computational mathematics and computational statistics converge?
- On the dynamical behaviour of FitzHugh-Nagumo systems: revisited
- Disorder, oscillatory dynamics and state switching: the role of c-Myc
- Error analysis of a specialized numerical method for mathematical models from neuroscience
- An immersed boundary framework for modelling the growth of individual cells: an application to the early tumour development
- Fluctuations in transcription factor binding can explain the graded and binary responses observed in inducible gene expression
- Memristive model of the Barnacle giant muscle fibers
- Applying a Rigorous Quasi-Steady State Approximation Method for Proving the Absence of Oscillations in Models of Genetic Circuits
- Probabilistic Description of Model Set Response in Neuromuscular Blockade
- The ghosts of departed quantities in switches and transitions
- Spatio-temporal modelling of the Hes1 and p53-Mdm2 intracellular signalling pathways
- On the mathematical basis of solid friction
- Approximations and their consequences for dynamic modelling of signal transduction pathways
- Perturbation approximation of solutions of a nonlinear inverse problem arising in olfaction experimentation
- Collective oscillations in coupled-cell systems
- An observer for mass-action chemical reaction networks
- Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors
- Electrical propagation of condensed and diffuse ions along actin filaments
- Partial equilibrium approximations in apoptosis. II: The death-inducing signaling complex subsystem
- Tick, tock, circadian clocks
- The influence of nuclear compartmentalisation on stochastic dynamics of self-repressing gene expression
- The low conductance mitochondrial permeability transition pore confers excitability and CICR wave propagation in a computational model
- An alternative bifurcation analysis of the Rose--Hindmarsh model
- RNA oscillator: limit cycle oscillations based on artificial biomolecular reactions
- A tracking approach to parameter estimation in linear ordinary differential equations
- Computing optimal properties of drugs using mathematical models of single channel dynamics
- Introduction to the geometric theory of ODEs with applications to chemical processes
- Discontinuity mappings for stochastic nonsmooth systems
- Microbial metabolism and growth under conditions of starvation modelled as the sliding mode of a differential inclusion
- Wiggly canards: growth of traveling wave trains through a family of fast-subsystem foci
- Bioinformatics: organisms from Venus, technology from Jupiter, algorithms from Mars
- Solving the chemical master equation for monomolecular reaction systems analytically
- Synapses and Neurons: Basic Properties and Their Use in Recognizing Environmental Signals
- BISTABILITY AND SELF-OSCILLATIONS IN CELL CYCLE CONTROL
- Motoneuron model of self-sustained firing after spinal cord injury
- Amplified biochemical oscillations in cellular systems
- Differential Algebra and System Modeling in Cellular Biology
- Sustained simultaneous glycolytic and insulin oscillations in \(\beta\)-cells
- The immersed molecular finite element method
- Mean field analysis of a spatial stochastic model of a gene regulatory network
- Kernel-based profile estimation for ordinary differential equations with partially measured state variables
- Inferring (biological) signal transduction networks via transitive reductions of directed graphs
- A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales
- Error analysis of a stochastic immersed boundary method incorporating thermal fluctuations
- The regulation of gene expression in eukaryotes: bistability and oscillations in repressilator models
- Fractional time scale in calcium ion channels model
- Dynamic optimization of metabolic networks coupled with gene expression
- Novel phase-fitted symmetric splitting methods for chemical oscillators
- Hopf bifurcation in a gene regulatory network model: molecular movement causes oscillations
- Computational software
- A graph-based approach for the approximate solution of the chemical master equation
- Synchronized dynamics and non-equilibrium steady states in a stochastic yeast cell-cycle net\-work
- A modified Hodgkin-Huxley model
- Two-dimensional finite element model to study unsteady state \(\text{Ca}^{2+}\) diffusion in neuron involving ER LEAK and SERCA
- Role of coupling delay in oscillatory activity in autonomous networks of excitable neurons with dissipation
- Causal structure of oscillations in gene regulatory networks: Boolean analysis of ordinary differential equation attractors
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