On the geometry of chemical reaction networks: Lyapunov function and large deviations

DOI10.1007/s10955-018-2035-8zbMath1401.60042arXiv1710.07240OpenAlexW3101874238WikidataQ129931669 ScholiaQ129931669MaRDI QIDQ1785575

Andrea Agazzi, Amir Dembo, Jean-Pierre Eckmann

Publication date: 1 October 2018

Published in: Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1710.07240

zbMATH Keywords

dynamical systemslarge deviationstropical geometrymolecular networks

Mathematics Subject Classification ID

Classical flows, reactions, etc. in chemistry (92E20) Large deviations (60F10) Chemical kinetics in thermodynamics and heat transfer (80A30)

Related Items (6)

Large deviations for Markov jump processes with uniformly diminishing rates ⋮ Modeling of chemical reaction systems with detailed balance using gradient structures ⋮ Prevalence of deficiency-zero reaction networks in an Erdös–Rényi framework ⋮ Tier structure of strongly endotactic reaction networks ⋮ Detailed balance, local detailed balance, and global potential for stochastic chemical reaction networks ⋮ Large deviations of Markov chains with multiple time-scales

Cites Work

• Perturbative calculation of quasi-potential in non-equilibrium diffusions: a mean-field example
• Lyapunov functions, stationary distributions, and non-equilibrium potential for reaction networks
• Large deviations theory for Markov jump models of chemical reaction networks
• A Geometric Approach to the Global Attractor Conjecture
• Centennial History of Hilbert's 16th Problem
• Brief introduction to tropical geometry
• The Logarithmic Limit-Set of an Algebraic Variety
• Large Deviations with Diminishing Rates
• Algebraic Statistics for Computational Biology
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