Ewens' sampling formula and related formulae: combinatorial proofs, extensions to variable population size and applications to ages of alleles

DOI10.1016/J.TPB.2005.02.004zbMATH Open1085.92027OpenAlexW2104680430WikidataQ47380931 ScholiaQ47380931MaRDI QIDQ2489965FDOQ2489965

Authors: Sabin Lessard, Robert Griffiths 

Publication date: 28 April 2006

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2005.02.004

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zbMATH Keywords

Poisson-Dirichlet processEwens' sampling formulaCoalescent processUrn modelGEM distributionAge distribution of allelesInfinitely-many-alleles modelLadder indices and heights

Mathematics Subject Classification ID

Problems related to evolution (92D15) Combinatorial probability (60C05)

Cites Work

• The coalescent
• The infinitely-many-neutral-alleles diffusion model
• Logarithmic combinatorial structures: A probabilistic approach
• The sampling theory of selectively neutral alleles
• Addendum to a paper of W. Ewens
• The latent roots of certain Markov chains arising in genetics: A new approach, I. Haploid models
• Pólya-like urns and the Ewens' sampling formula
• Line-of-descent and genealogical processes, and their applications in population genetics models
• The age of a mutation in a general coalescent tree
• Random partitions in population genetics
• Random discrete distributions invariant under size-biased permutation
• Partition structures, Polya urns, the Ewens sampling formula, and the ages of alleles
• Conditional genealogies and the age of a neutral mutant
• The frequency spectrum of a mutation, and its age, in a general diffusion model
• A countable representation of the Fleming-Viot measure-valued diffusion
• The ages of alleles and a coalescent
• Cycles, permutations and the stucture of the Yule process with immigration
• Lines of descent and the coalescent
• The population genealogy of the infinitely-many neutral alleles model
• Lines of descent in the diffusion approximation of neutral Wright-Fisher models
• Title not available (Why is that?)
• Times on trees, and the age of an allele
• Rare alleles and selection.
• On the genealogy of a sample of neutral rare alleles.

Cited In (27)

• Inductive determination of allele frequency spectrum probabilities in structured populations
• On Poisson approximations for the Ewens sampling formula when the mutation parameter grows with the sample size
• Bayesian nonparametric estimators derived from conditional Gibbs structures
• Random permutations and the Ewens sampling formula in genetics
• Shannon information entropy, soliton clusters and Bose-Einstein condensation in log gravity
• Single and simultaneous binary mergers in Wright-Fisher genealogies
• The distribution of the frequencies of age-ordered alleles in a diffusion model
• Ancestral inference from haplotypes and mutations
• Partition structures, Polya urns, the Ewens sampling formula, and the ages of alleles
• Generalized Poisson--Dirichlet Distributions Based on the Dickman Subordinator
• Diffusion approximations for one-locus multi-allele kin selection, mutation and random drift in group-structured populations: a unifying approach to selection models in population genetics
• On sampling distributions for coalescent processes with simultaneous multiple collisions
• A conjugate class of random probability measures based on tilting and with its posterior analysis
• Approximate Ewens formulae for symmetric overdominance selection
• Site frequency spectra from genomic SNP surveys
• Invariant expectation values in the sampling of discrete frequency distributions
• An asymptotic sampling formula for the coalescent with recombination
• Beta-coalescents and continuous stable random trees
• Sampling formulae for symmetric selection
• Approximate sampling formulae for general finite-alleles models of mutation
• Average abundancy of cooperation in multi-player games with random payoffs
• Title not available (Why is that?)
• Recurrence equations for the probability distribution of sample configurations in exact population genetics models
• Neutral community theory: How stochasticity and dispersal-limitation can explain species coexistence
• Allele frequency spectra in structured populations: novel-allele probabilities under the labelled coalescent
• Coalescent lineage distributions
• Convergence time to the Ewens sampling formula in the infinite alleles Moran model

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