Chaotic dynamics in an electronic model of a genetic network

DOI10.1007/S10955-005-7009-YMaRDI QIDQ2492837zbMATH OpenOpenAlexWikidataFDO

Authors Leon Glass, Theodore J. Perkins, Jonathan Mason, Hava T. Siegelmann, R. Edwards

Publication date 14 June 2006

Published in Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.472.6524

zbMATH Keywords

chaoselectronic circuitgenetic networksinverse problemlimit cycle oscillationpiecewise-linear ordinary differential equationsPoincaré mapstatistical methodssymbolic dynamicstime seriestopological entropy

Mathematics Subject Classification ID

Time series analysis of dynamical systems (37M10) Dynamical systems in biology (37N25) Classical dynamic and nonequilibrium statistical mechanics (general) (82C05) Genetics and epigenetics (92D10) Analytic circuit theory (94C05)

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Cites work

• An order parameter for networks of automata
• Analysis of continuous-time switching networks
• Chaos in high-dimensional neural and gene networks
• Combinatorial explosion in model gene networks.
• Evolving complex dynamics in electronic models of genetic networks
• Numerical and theoretical studies of noise effects in the Kauffman model
• Qualitative simulation of genetic regulatory networks using piecewise-linear models
• Stable oscillations in mathematical models of biological control systems

Cited in

(21)

• Hybrid models of genetic networks: mathematical challenges and biological relevance
• Inferring models of gene expression dynamics
• Forecasting polynomial dynamics
• Discrete time piecewise affine models of genetic regulatory networks
• Chaos in a continuous-time Boolean network
• Experiments on autonomous Boolean networks
• Causal structure of oscillations in gene regulatory networks: Boolean analysis of ordinary differential equation attractors
• Living on the edge of chaos: minimally nonlinear models of genetic regulatory dynamics
• Dynamics in hybrid complex systems of switches and oscillators
• GENE EXPRESSION PROGRAMMING AND ONE-DIMENSIONAL CHAOTIC MAPS
• ELECTRONIC DESIGN OF SYNTHETIC GENETIC NETWORKS
• Inducing chaos in a gene regulatory network by coupling an oscillating dynamics with a hysteresis-type one
• Qualitative models and experimental investigation of chaotic NOR gates and set/reset flip-flops
• Horseshoes in 4-dimensional piecewise affine systems with bifocal heteroclinic cycles
• Chaotic dynamics and diffusion in a piecewise linear equation
• Chaos in a ring circuit
• Evolving complex dynamics in electronic models of genetic networks
• Multiple Scenarios of Transition to Chaos in the Alternative Splicing Model
• Entropy bounds for Glass networks
• Chaos in a discrete model of a two-gene system
• Dynamics in high-dimensional model gene networks

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