SVM-BALSA: Remote homology detection based on Bayesian sequence alignment

DOI10.1016/J.COMPBIOLCHEM.2005.09.006zbMATH Open1102.92029DBLPjournals/candc/Webb-RobertsonOM05OpenAlexW1975394843WikidataQ52033978 ScholiaQ52033978MaRDI QIDQ2500352FDOQ2500352

Bobbie-Jo M. Webb-Robertson, Christopher S. Oehmen, Melissa Matzke

Publication date: 23 August 2006

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2005.09.006

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zbMATH Keywords

Support vector machineRemote homology

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Problems related to evolution (92D15) Computational methods for problems pertaining to biology (92-08) Mathematical programming (90C99)

Cites Work

• Title not available (Why is that?)
• Matching Sequences under Deletion/Insertion Constraints

Cited In (5)

• Robust Remote Homology Detection by Feature Based Profile Hidden Markov Models
• Title not available (Why is that?)
• A feature vector integration approach for a generalized support vector machine pairwise homology algorithm
• Integrating subcellular location for improving machine learning models of remote homology detection in eukaryotic organisms
• Title not available (Why is that?)

Uses Software

• FASTA
• PSI-BLAST
• BLAST

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