Putative anticodons in mitochondrial trna sidearm loops: pocketknife tRNAs?

DOI10.1016/J.JTBI.2013.08.030MaRDI QIDQ2632356zbMATH OpenOpenAlexWikidataFDO

Authors Hervé Seligmann

Publication date 14 May 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2013.08.030

zbMATH Keywords

tRNA synthetasecloverleaf secondary structureloop-loop interactionmisacylationtRNA L-shape

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Recommendations

• Genetic code from tRNA point of view
• Overlapping genes coded in the 3'-to-5'-direction in mitochondrial genes and 3'-to-5' polymerization of non-complementary RNA by an `invertase'
• \textit{tRNA genes} and the genetic code
• Symmetries by base substitutions in the genetic code predict \(2^\prime\) or \(3^\prime\) aminoacylation of tRNAs
• A polyphyletic model for the origin of tRNAs has more support than a monophyletic model

Cites work

• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• A polyphyletic model for the origin of tRNAs has more support than a monophyletic model
• Circular code motifs in transfer and 16S ribosomal RNAs: a possible translation code in genes
• Overlapping genes coded in the 3'-to-5'-direction in mitochondrial genes and 3'-to-5' polymerization of non-complementary RNA by an `invertase'
• Overlapping genetic codes for overlapping frameshifted genes in Testudines, and \textit{Lepidochelys olivacea} as special case
• Possible multiple origins of replication in primate mitochondria: alternative role of tRNA sequences

Cited in

(6)

• Circular tessera codes in the evolution of the genetic code
• Possible multiple origins of replication in primate mitochondria: alternative role of tRNA sequences
• The ribosome as a missing link in the evolution of life
• Dinucleotide circular codes and bijective transformations
• Mixed circular codes
• RNA editing and modifications of RNAs might have favoured the evolution of the triplet genetic code from an ennuplet code

Describes a project that uses

Uses Software

• tRNAscan-SE

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