Computational Inference Beyond Kingman's Coalescent

DOI10.1239/jap/1437658613zbMath1347.60120arXiv1311.5699OpenAlexW2131649208MaRDI QIDQ2949852

Jere Koskela, Paul A. Jenkins, Dario Spanò

Publication date: 2 October 2015

Published in: Journal of Applied Probability (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1311.5699

zbMATH Keywords

importance samplingpopulation genetics\(\Lambda\)-coalescentconditional sampling distribution\(\Xi\)-coalescentapproximate conditionals

Mathematics Subject Classification ID

Sampling theory, sample surveys (62D05) Applications of branching processes (60J85) Branching processes (Galton-Watson, birth-and-death, etc.) (60J80) Genetics and epigenetics (92D10) Exchangeability for stochastic processes (60G09)

Related Items

Full likelihood inference from the site frequency spectrum based on the optimal tree resolution, Asymptotic behaviour of sampling and transition probabilities in coalescent models under selection and parent dependent mutations, Multi-locus data distinguishes between population growth and multiple merger coalescents, Inference and rare event simulation for stopped Markov processes via reverse-time sequential Monte Carlo, A dual process for the coupled Wright-Fisher diffusion

Uses Software

• tsbridge

Cites Work

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