Importance sampling on coalescent histories. II: Subdivided population models

DOI10.1239/aap/1086957580zbMath1124.62317OpenAlexW2002715980MaRDI QIDQ4819490

Maria De Iorio, Robert C. Griffiths

Publication date: 24 September 2004

Published in: Advances in Applied Probability (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1239/aap/1086957580

zbMATH Keywords

importance samplingmigrationdiffusion processcoalescent processsubdivided population

Mathematics Subject Classification ID

Related Items (16)

Stationary distribution of a 2-island 2-allele wright-Fisher diffusion model with slow mutation and migration rates ⋮ Importance sampling on coalescent histories. I ⋮ Resampling: an improvement of importance sampling in varying population size models ⋮ Allele frequency spectra in structured populations: novel-allele probabilities under the labelled coalescent ⋮ Computational Inference Beyond Kingman's Coalescent ⋮ Bayesian parameter inference for partially observed stopped processes ⋮ Importance sampling and the two-locus model with subdivided population structure ⋮ Inference and rare event simulation for stopped Markov processes via reverse-time sequential Monte Carlo ⋮ Efficiently Inferring the Demographic History of Many Populations With Allele Count Data ⋮ Statistical tools for seed bank detection ⋮ Ancestral Graph with Bias in Gene Conversion ⋮ Slicing and dicing the genome: A statistical physics approach to population genetics ⋮ A sequentially Markov conditional sampling distribution for structured populations with migration and recombination ⋮ The time machine: a simulation approach for stochastic trees ⋮ Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models ⋮ Inductive determination of allele frequency spectrum probabilities in structured populations

Cites Work

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• Estimation in an island model using simulation
• The coalescent and genealogical process in geographically structured population
• Simulating probability distributions in the coalescent
• The ages of mutations in gene trees
• Ancestral inference in population genetics
• Coalescence time for two genes from a subdivided population
• Monte Carlo inference methods in population genetics
• The sampling theory of selectively neutral alleles
• Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models
• Inference in Molecular Population Genetics
• Importance sampling on coalescent histories. I
• Inference from gene trees in a subdivided population

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