A statistical framework for the analysis of ChIP-seq data
DOI10.1198/JASA.2011.AP09706zbMATH Open1229.62146OpenAlexW2052562387WikidataQ31007638 ScholiaQ31007638MaRDI QIDQ3111185FDOQ3111185
Ron Stewart, Sunduz Keles, Guangjin Pan, Dongjun Chung, Pei Fen Kuan, James Thomson
Publication date: 18 January 2012
Published in: Journal of the American Statistical Association (Search for Journal in Brave)
Full work available at URL: http://europepmc.org/articles/pmc4608541
Recommendations
- A fully Bayesian hidden Ising model for ChIP-seq data analysis
- PICS: Probabilistic Inference for ChIP-seq
- Improved detection of epigenomic marks with mixed-effects hidden Markov models
- Multiple testing of local maxima for detection of peaks in ChIP-Seq data
- Mixture Modeling for Genome‐Wide Localization of Transcription Factors
Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)
Cited In (9)
- Inference of finite mixture models and the effect of binning
- Bayesian analysis for mixtures of discrete distributions with a non-parametric component
- Spatio-temporal model for multiple ChIP-seq experiments
- PICS: Probabilistic Inference for ChIP-seq
- A Bayesian Graphical Model for ChIP-Seq Data on Histone Modifications
- Statistical method for modeling sequencing data from different technologies in longitudinal studies with application to Huntington disease
- A unified statistical framework for single cell and bulk RNA sequencing data
- A statistical framework for eQTL mapping using RNA-seq data
- A simulation framework for correlated count data of features subsets in high-throughput sequencing or proteomics experiments
This page was built for publication: A statistical framework for the analysis of ChIP-seq data
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3111185)