A Bayesian Graphical Model for ChIP-Seq Data on Histone Modifications
From MaRDI portal
Publication:4916928
DOI10.1080/01621459.2012.746058zbMath1379.62079MaRDI QIDQ4916928
Peter Mueller, Yuan Ji, Riten Mitra, Shoudan Liang, Lu Yue
Publication date: 26 April 2013
Published in: Journal of the American Statistical Association (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1080/01621459.2012.746058
Markov chain Monte Carlo; network model; Markov random fields; autologistic regression; epigenetics; pathway dependence
62P10: Applications of statistics to biology and medical sciences; meta analysis
Uses Software
Cites Work
- Unnamed Item
- Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
- Sparse inverse covariance estimation with the graphical lasso
- Autologistic models with interpretable parameters
- On Monte Carlo methods for estimating ratios of normalizing constants
- Monte Carlo methods in Bayesian computation
- Experiments in stochastic computation for high-dimensional graphical models
- A Statistical Framework for the Analysis of ChIP-Seq Data
- Learning Causal Bayesian Network Structures From Experimental Data
- A Statistical Framework for Expression-Based Molecular Classification in Cancer
- Modeling Protein Expression and Protein Signaling Pathways